LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g01718	ATGGAGTCATCTGTTAATGGAGCTGAGTCTTTATCAGAGGATCAGAGTTCAGTTTCTGCTGTAGCTCAAGATCTTCCTTCAACGTCTGAGACTCCCCGGCCTTCTCGGCCTCCCCTCAGATCATCTAGAAATCATGCAACTTCTTCCACATCCTATTTGACTGGTCATCATAATTATGGCAAGAAGACTATCCACCATCAAAATGGGTATGTAATTAATCAAAAGCTACCTGATCATGAGGCCAACAGTGTACATCATGAAGAATTACCAAATATGACAAAGCACGTTTATGATCTCAGTAAAAAATCAGGCAATATGAAGCTGGGTGGTGGTGGTGTTCTCAATAAGACAGGAGAAAGTAGTTCAGGGAAGAATGTCTCTGCAATGGATACAAATGGCATGTTGGAATCTGAAAGCTTTGTCAAAGGCTCTTCTAAAGGACATACTGATCAAACAAAGAATTGCTGTCAGTCAGAGGTTACGTTTTGTCCAAGTCCTCAGAATAGCCTCTATTCTGCTACTGTCTATTCTGAAGCCAAGCAGAGTTTCACCAATACTGAAGTCAGTGAATGCATTAGTGTTGATAAATCAGGTGAAAGTTGTGAAGTTACTAATTCCTGTGATTTTAACGAGAGCAGGAAAACAAGCATTTGTAGAGGGAGTACTGGAAGTGATGTTAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATTAGATGGGAAGCAATTCAAGCCATTAGAGCTCGTGATGGGATGTTAGAGATGAGACATTTCAGGTTAGTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTTTATCTAGCAGAGTTGTCTGGCACAAGAACTTGTTTTGCCATGAAGGTTATGGATAAAACAGAGCTGGCAAGGCGCAAGAAGCTTCTGAGGGTTCAGACAGAAAGAGAGATATTGCAGTCGCTGGATCATCCTTTTCTACCAACATTATATACACACTTTGAGACTGAGACATTCTCGTGCTTGGTAATGGAGTTCTGCCCTGGTGGAGACCTGCATGCACTACGGCAAAGACAGCCCGGGAAATGTTTTTCGGAGCACGCTGCCAGGTTTTATGTAGCGGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATTATATACAGAGACCTTAAGCCTGAGAATGTGTTGGTTAGGGAAGATGGTCATATAATGCTTTCAGATTTTGACCTCTCTCTAAGGTGCACCGTCAGCCCAACTCTTGTAAAGTCCTCAAACTTAAGCTTGGACAATAAAAGCTCAGGATATTGCATTCAGCCTGCTTGCATTGAACCAACTTGTGTAATGCGGCCAGATTGCATCCAACCTTCATGTTTTACACCGCGTTTTCTATCTGGAAAATCCAAGAAAGAAAAAAGGTATAAATCAAAGAATGAAATGCATAATCAGGTAACCCCTCTCCCTGAGCTCATTGCCGAGCCCACAAATGCCCGATCAATGTCCTTTGTGGGTACACATGAGTACTTGGCGCCTGAAATTATTAAAGGTGAAGGGCACGGCAGTGCTGTAGATTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGTAGGACACCATTTAAGGGTTCAGTGAATCGAGCAACTCTGTTTAATGTGGTTGGCCAGCCCTTAAGGTTTCCAGAATCCCCTACCGTCAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTGCTTGTCAAAGAGCCCCAGCATCGTCTTGCCTATAGACGCGGAGCTACAGAAGTTAAACAGCATCCATTCTTTCAGAATGTTAATTGGGCACTGATCCGTTGTGCGAGTCCTCCAGAGGTGCCTAGACAAGCCATGAGAGCACTCGCAACTGAACAGGTGCCTGGTGTGAAGCCTTCTGGTAACTATTTGGATATTGAATTCTTTTGA	1950	0.4349	MESSVNGAESLSEDQSSVSAVAQDLPSTSETPRPSRPPLRSSRNHATSSTSYLTGHHNYGKKTIHHQNGYVINQKLPDHEANSVHHEELPNMTKHVYDLSKKSGNMKLGGGGVLNKTGESSSGKNVSAMDTNGMLESESFVKGSSKGHTDQTKNCCQSEVTFCPSPQNSLYSATVYSEAKQSFTNTEVSECISVDKSGESCEVTNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGMLEMRHFRLVKKLGCGDIGSVYLAELSGTRTCFAMKVMDKTELARRKKLLRVQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKCFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNLSLDNKSSGYCIQPACIEPTCVMRPDCIQPSCFTPRFLSGKSKKEKRYKSKNEMHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQNVNWALIRCASPPEVPRQAMRALATEQVPGVKPSGNYLDIEFF	649

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g01718	649	Gene3D	Transferase(Phosphotransferase) domain 1	352	420	-	-
	Bach1g01718	649	Pfam	Protein kinase domain	269	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01718	649	Pfam	Protein kinase domain	502	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01718	649	CDD	STKc_phototropin_like	266	625	-	-
	Bach1g01718	649	PANTHER	FLIPPASE KINASE 1-RELATED	101	627	-	-
	Bach1g01718	649	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	389	401	IPR008271	GO:0004672\|GO:0006468
	Bach1g01718	649	FunFam	serine/threonine-protein kinase D6PK-like	500	623	-	-
	Bach1g01718	649	MobiDBLite	consensus disorder prediction	1	61	-	-
	Bach1g01718	649	FunFam	serine/threonine-protein kinase D6PK-like	352	419	-	-
	Bach1g01718	649	Gene3D	Transferase(Phosphotransferase) domain 1	499	623	-	-
	Bach1g01718	649	Gene3D	Phosphorylase Kinase; domain 1	266	351	-	-
	Bach1g01718	649	SMART	serkin_6	268	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01718	649	ProSiteProfiles	Protein kinase domain profile.	268	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01718	649	MobiDBLite	consensus disorder prediction	1	57	-	-
	Bach1g01718	649	FunFam	Serine/threonine-protein kinase D6PK-like	266	351	-	-
	Bach1g01718	649	SUPERFAMILY	Protein kinase-like (PK-like)	245	627	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g01718	Bach-Chr1	30613785	30616623	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g01718	193	649	AGC Kinase Gene Family	AT5G47750	72.785	0.0	701

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Bach1g01718		Pkinase	2.3e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g01718	K08286		-	gmx:100802402	942.954