Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01689 ATGGCTTCAGCTCTTGGAAAACATGGTGGAAAACATGGTGGTGATTCCATGATTGTTGATAAGCTCCCTGAAGAGATCAATGAAATGAAGATTAAGGATGAAAAGGAACTGGAGGCAACAATGGTAGATGGGAATGGAACTGAAACTGGACACATTATTGTTACAACAATTGGTGGTAGAGATGGTCAACCCAAACAGACCATTAGTTACATGGCCGAGCGTGTGGTAGGACAAGGTTCATTTGGTATTGTGTTTCAGGCCAAGTGTCTTGAAACTGGAGAAACTGTTGCAATCAAGAAGGTTTTGCAAGATAAAAGATACAAGAATCGTGAATTGCAAACAATGCGCCTTCTTGATCATCCTAATATTGTGTCACTCAAACACTGCTTCTTTTCTACCACCGACAAAGATGAACTCTATCTCAATTTGGTTCTCGAGTATGTACCTGAGACTATATATCGTGTGGTGAAACATTATAGCAAGGCAAATCAACGGATGCCCCTGCTATATGTTAAACTATATACATACCAGATTTGTAGAGCTCTGGCTTATATTCATGGTTGTGTTCGGGTATGCCACAGGGACATTAAGCCGCAGAATCTACTGGTTAATCCCCATACTCACCAGGTCAAGCTTTGTGATTTTGGAAGTGCTAAAGTTCTGGTTAAAGGTGAGCCTAATATATCGTATATATGTTCTCGCTATTATCGAGCACCTGAACTCATATTTGGAGCAACTGAATATACTACTGCAATTGACATGTGGTCTGTGGGCTGTGTCCTTGCTGAGCTGCTCTTGGGGCAGCCTCTCTTCCCAGGAGAAAGTGGAGTTGATCAACTTGTTGAGATTATAAAGGTACTTGGGACTCCAACTCGTGAGGAAATTAAATGCATGAATCCAAACTATACAGAGTTCAAGTTCCCTCAAATCAAGGCTCACCCTTGGCATAAGATATTCCATAAGCGTATGCCCCCAGAAGCGGTTGATCTTGTTTCAAGACTCCTCCAGTACTCTCCAAACTTACGATGCACTGCTTTAGATGCATGTGTCCACCCATTTTTTGATGAACTCCGTGATCCTAACACCCGTCTCCCCAACGGGCGCCCTTTGCCTCCTCTCTTTAACTTTAAACCTCAAGAGCTAAAAGGAACAACGTTGGAGCTGCTATGCAAACTTGTTCCAGAACATGCTCGGAAGCAGTGTCCATCCCTTAATTTCTAG 1221 0.4267 MASALGKHGGKHGGDSMIVDKLPEEINEMKIKDEKELEATMVDGNGTETGHIIVTTIGGRDGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNIVSLKHCFFSTTDKDELYLNLVLEYVPETIYRVVKHYSKANQRMPLLYVKLYTYQICRALAYIHGCVRVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDACVHPFFDELRDPNTRLPNGRPLPPLFNFKPQELKGTTLELLCKLVPEHARKQCPSLNF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01689 406 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01689 406 FunFam Shaggy-related protein kinase kappa 150 398 - -
Bach1g01689 406 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524
Bach1g01689 406 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01689 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Bach1g01689 406 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 34 400 - -
Bach1g01689 406 FunFam Glycogen synthase kinase-3 beta 54 149 - -
Bach1g01689 406 CDD STKc_GSK3 65 357 IPR039192 -
Bach1g01689 406 Gene3D Transferase(Phosphotransferase) domain 1 150 398 - -
Bach1g01689 406 SUPERFAMILY Protein kinase-like (PK-like) 69 379 IPR011009 -
Bach1g01689 406 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Bach1g01689 406 Pfam Protein kinase domain 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01689 Bach-Chr1 30360486 30364719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01689 70 396 MAP Kinase Gene Family AT1G73670 36.047 4.23e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bach1g01689 Pkinase 9.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01689 K27413 - qsa:O6P43_008947 787.334