Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01658 ATGCTATTCCTCGGGAATGGCGATTCCGTTTTCGGAGCAGGAAGATCGGTGATGAGCATGGAGGATACCTCAAAGAAGAGACCTTTCTTCAGCTCACCAGAGGAACTGTTGTTCGACGAGGAATATTACGGCGAGCAGTTTCCGGAGAAGAAGCGCCGCCTCACTTCGGAGCAGGTCCATCTGTTGGAGGAAAGCTTTGAGGCAGAGAACAAACTGGAGCCCGAGAGGAAGACCCAGTTGGCTAAGAAGCTGGGGTTGCAGACAAGGCAGGTGGCTGTGTGGTTTCAGAACCGCCGGGCTCGGTGGAAGACCAAGCAACTTGAAAGGGATTATGATCTTCTCAAGTCTTCCTACGATTCCCTTCTATCAAAGTATGAATCTGTTGCAAAGGAGAATGAAAAGCTCAAAGCTGAGGTGGTATCATTAAATGAGAAGCTTCAAATTGAAGACATGTCCGGAACACCAATATCAGATGAAAAAACTGTGCCAGTTGCTGTGGATATGGTCCAAATTCCGGCACTGCCATTCAACATGAAGGTGGAGGATCGTCTGAGTTCTGGGAGTGGTGGAAGTGCAGTGGTGGATGAGGATAGCCGGCAGCTGGTTGTGGACAGCGTTGATTCATACTTTGCCGCTGATAATTATGCTGATGCTGGTGGATGCCAGCTAGCCGGAGGCCATAAAGTTCAGTCGGAGGAGGATGATGGCAGCGATGATGGCCGGAGTTACTTCTCCGACGTGTTTGTGGCTGAACCACAAAACCATGAGGACGGCGAGACGTTGGATTGGTGGGTTTGGTCTTAA 804 0.5012 MLFLGNGDSVFGAGRSVMSMEDTSKKRPFFSSPEELLFDEEYYGEQFPEKKRRLTSEQVHLLEESFEAENKLEPERKTQLAKKLGLQTRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLSKYESVAKENEKLKAEVVSLNEKLQIEDMSGTPISDEKTVPVAVDMVQIPALPFNMKVEDRLSSGSGGSAVVDEDSRQLVVDSVDSYFAADNYADAGGCQLAGGHKVQSEEDDGSDDGRSYFSDVFVAEPQNHEDGETLDWWVWS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01658 267 CDD homeodomain 50 106 IPR001356 GO:0003677
Bach1g01658 267 PRINTS Lambda-repressor HTH signature 76 85 IPR000047 GO:0003677
Bach1g01658 267 PRINTS Lambda-repressor HTH signature 85 101 IPR000047 GO:0003677
Bach1g01658 267 Gene3D - 43 111 - -
Bach1g01658 267 Pfam Homeobox associated leucine zipper 105 147 IPR003106 GO:0006355|GO:0043565
Bach1g01658 267 Coils Coil 118 145 - -
Bach1g01658 267 SMART HOX_1 48 109 IPR001356 GO:0003677
Bach1g01658 267 ProSitePatterns 'Homeobox' domain signature. 80 103 IPR017970 GO:0000981|GO:0006355
Bach1g01658 267 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 39 192 IPR045224 GO:0003700
Bach1g01658 267 FunFam Homeobox-leucine zipper protein HAT5 43 107 - -
Bach1g01658 267 ProSiteProfiles 'Homeobox' domain profile. 45 105 IPR001356 GO:0003677
Bach1g01658 267 Pfam Homeodomain 50 103 IPR001356 GO:0003677
Bach1g01658 267 SUPERFAMILY Homeodomain-like 50 116 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01658 Bach-Chr1 30117337 30119222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01658 1 266 Homeobox Transcription Factor Family AT3G01470 57.037 3.23e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach1g01658 Homeodomain 7.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01658 K09338 - qsa:O6P43_008987 360.918