Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01653 ATGTATAGAATAATATCCACGCCGGCCTCTAAATTCCGAAAATTCCGCTTCCAAGCCACCACTGACAAGGAACACGCCCACCATATTCTATGGCGTTACCAAATCCTCGACCCAAACAGCGACATTGTTGCAAAATGGAACATGGTATTCCTCATCGCCAGTCTTCTTGCCCTTTTCGTAGACCCTCTTTATTTCTACCTACCCAATGTCGGAGGCCCGGCTTGCTTGAGCACCGATACCTCGTTGAGCATCGTGGTCACTTTCCTTCGCTCCGTGGCAGACCTTTTCTATGTTCTCCACATGCTCATGAAGTTTCGTACCGCCTTTGTATCCCCGAGTTCTAGGGTGTTTGGCCGCGGTGAGCTGGTTACGGATCCCCGAGAAATTGCCGTTCGCTATTTGAAGACAGATTTTGTGATCGATCTCGCTGCAACGCTTCCACTGCCCCAGATGGTCATTTGGTTAGTAATTCCAGCATCAAAGAACTCAAGAGCTGATCATGCCAACAACACTCTTGCTCTTTTTATTCTTATTCAGTATGTTCCTAGACTGTTTCTTATCTTCCCTTTGAACCGGCGTCTTTTAAAATCCTCGGACTTTCTCACCAAGACTCCCTGGACAGGAGCTGTATACAATCTGATGCTCTACTTGCTAGCCAGTCATGTTATAGGAGCTTCATGGTATCTGTCCTCGATAGGGCGACAATTTTCCTGCTGGAAATCTGAGTGCAAAAAGGAAAATTCAAATGTCGTGGCTTGCCTTCCTACTTTTCTCAATTGTAATAGTTTGTCGTCACCTGATAGGAAGTACTGGCTTAATATCACCCAAGTTGTTGCCAATTGTGATGTAAAGAACGAGGACGTCAAATATAAGTTTGGGATTTTTGCAGATGCTTTTAGTAATGACGTAACTTCTTCCAAATTTAAGGAGAGATACTTCTATTGTCTATGGTGGGGCTTAAGAAATTTAAGTTCATATGGACAGACTTTGGACACCACCACCTACCTTGGTGAGACAACTTTTTGCATCTTCTTATGCATTGTTGGATTAATTCTCTTCTCACTACTGATTGGCAACATGCAGACATATATTACATCAATGTCGGTAAGAATTGAAGAATGGAGGATTAAAAAAAGAGACACTGAAGAATGGATGAGGCATCGGCAGTTACCTCCAGAATTGCAGAGTCGCGTCCGTCGCTTTGTTCAATATAAATGGATTGCAACTAGAGGAGTTGACGAAGAATCCATATTGCGCTCATTACCTATAGATCTTCGTCGTGAAATACAACGCCATTTGTGTCTTTCTCTTGTTTGCCGTGTCCCCTTCTTCTCACAAATGGACGATCAGCTTCTTGATGCCATTTGCGAACGCCTTAGCTCATCATTGAATACAGAGGGAACCTACATTTTTCAGGAGGGAGATCCAGTAGATGAAATGGTGTTTGTCATTAGAGGGCAACTGGAGAGCTGCACAACCGATGGAGGAAGGTCAGGGTTCTTCAACTCCATCACCCTTAGACCTGGTGACTTCTGTGGGGAAGAATTATTGACATGGGCCTTAATGCCAAACTCAAGTCCAATCTTGCCTTCTTCTACTCGGACTGTTAGAGCCCTTACTGAAGTTGAAGCTTTTGCCCTACAGGCAGAGGATCTGAAAATTGTGGCTAGTCAATTTAAACGTCTTCACAGTATGAAACTTCAGCATGCGTTTAGGTATTATTCCCATCAGTGGAGGACATGGGCTGCATGCTTCATACAAGCTGCCTGGAGAAGGCATCTAAGAAGGAAGGCCACAAGGGAGTTATCCATGAAAGAAAGCCTCTACTACATGGCAATATCTGAGGGCGAATCTAGTTATGAGGACGAGATCGCAAGCTCCTCATCGAGTAATGCAAATAGTGTTCAAAATCTTGGTACTACTGTTTTAGCCTCTAAGTTTGCTGCAAATACTAAGCGGGGTGCTGCCAGTAACAGTAAAATGCGAGCCAGGGATCCTGTTCCCCAGTTGTTCAAACCAGAAGAACCTAATTTCTCTCAAGACCATGATGATGTTTAA 2058 0.4407 MYRIISTPASKFRKFRFQATTDKEHAHHILWRYQILDPNSDIVAKWNMVFLIASLLALFVDPLYFYLPNVGGPACLSTDTSLSIVVTFLRSVADLFYVLHMLMKFRTAFVSPSSRVFGRGELVTDPREIAVRYLKTDFVIDLAATLPLPQMVIWLVIPASKNSRADHANNTLALFILIQYVPRLFLIFPLNRRLLKSSDFLTKTPWTGAVYNLMLYLLASHVIGASWYLSSIGRQFSCWKSECKKENSNVVACLPTFLNCNSLSSPDRKYWLNITQVVANCDVKNEDVKYKFGIFADAFSNDVTSSKFKERYFYCLWWGLRNLSSYGQTLDTTTYLGETTFCIFLCIVGLILFSLLIGNMQTYITSMSVRIEEWRIKKRDTEEWMRHRQLPPELQSRVRRFVQYKWIATRGVDEESILRSLPIDLRREIQRHLCLSLVCRVPFFSQMDDQLLDAICERLSSSLNTEGTYIFQEGDPVDEMVFVIRGQLESCTTDGGRSGFFNSITLRPGDFCGEELLTWALMPNSSPILPSSTRTVRALTEVEAFALQAEDLKIVASQFKRLHSMKLQHAFRYYSHQWRTWAACFIQAAWRRHLRRKATRELSMKESLYYMAISEGESSYEDEIASSSSSNANSVQNLGTTVLASKFAANTKRGAASNSKMRARDPVPQLFKPEEPNFSQDHDDV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01653 685 FunFam Cyclic nucleotide-gated ion channel 1 441 559 - -
Bach1g01653 685 SMART cnmp_10 443 574 IPR000595 -
Bach1g01653 685 FunFam Cyclic nucleotide-gated ion channel 1 370 434 - -
Bach1g01653 685 Pfam Cyclic nucleotide-binding domain 466 554 IPR000595 -
Bach1g01653 685 Gene3D - 46 368 - -
Bach1g01653 685 CDD CAP_ED 443 574 IPR000595 -
Bach1g01653 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 677 - -
Bach1g01653 685 MobiDBLite consensus disorder prediction 651 685 - -
Bach1g01653 685 ProSiteProfiles cAMP/cGMP binding motif profile. 443 553 IPR000595 -
Bach1g01653 685 SUPERFAMILY Voltage-gated potassium channels 38 365 - -
Bach1g01653 685 Gene3D Helix hairpin bin 370 434 - -
Bach1g01653 685 Pfam Ion transport protein 46 369 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach1g01653 685 SUPERFAMILY cAMP-binding domain-like 373 564 IPR018490 -
Bach1g01653 685 Gene3D Jelly Rolls 441 561 IPR014710 -
Bach1g01653 685 ProSiteProfiles IQ motif profile. 579 607 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01653 Bach-Chr1 30079410 30083679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01653 29 685 Ion Channels AT5G14870 68.351 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01653 K05391 - gmx:100802812 1073.54