Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01649 ATGTATAATAAGTGGTTGTTTGGCCATACCCATATGAAGATGTCGTTGATTCATCATCAAATCCAGCAAAAAGATGGGTACTTGAGCTACCCACCTCCGGTTTTGCCTTCATCTTCACCCTCTTACCCTGATGCTTTCCTCAGAGAATCAATGTCTTCCTCCTCGTCACCACCATCATCTGGTACTAGGATTAGTCCTGCTGTTCTTTTCATTATAGTGATCCTGGCTGTACTGTTTTTCGTTTCTGGTCTGCTCCATCTGCTCGTTAGATTTCTCATAAAGCACCCATCATCTTCAGCATCTACTCAATCTAATAGACACCATGAAATTTCTACCTCTGATGTTCTTCAAAGGCAACTTCAACAACTGTTTAATCTGCATGACTCGGGTCTAGATCAAGCATTCATCGATGCACTCCCCGTTTTCCAGTATAAAGAGATAGTGGGTCTGAAAGAACCATTTGACTGTGCTGTTTGTCTGTCTGAATTTTCTGAGAAGGACAAGCTCAGGTTGCTCCCTTTGTGCAGCCATGCTTTTCATATCAGTTGTATAGACACTTGGCTCCTGTCTAATTCAACATGCCCACTTTGTAGAGGAACCCTTTTTACTCCTGGCCTTTCAATGGAAAACCCAATATTTGATTTTGATGATTTAAGGGAAGAAGATGGATACCCCTGTAATATTCAAAATCGTTTCACTTCCAGACAAAAAAATGTTGAGATTGAAAAAACTGTTGAGAAAGGGGTTTTCCCAGTGAGACTTGGTAAGTTTAGAAGGCTGAGTGTGGAGGCAGGAGAGGTTGCAGGAGGAGAGACTAGTAGCAGTAATTTAGATGCGAGAAGATGTTATTCAATGGGATCTTATCAATATGTGCTTGGCAACTCAGACCTTCGAATTTCCTTGAACCATGATGATGCCAACCTCACCAAAAGGACAGAACACACTGAGAAGCTTTCAATTGAAGGGGATTTGGAAGCAAAGAAGATTAGCAGTGTGAGTAAAGGTGAGAGCTATTCTGTTTCCAAAATCTGGCTGTGGTCAAAAAAGGGGAAATTTTCAAGTTCTTCAGATACTCAAATGGGGTTGCCATTGCCATCACCTCTCAATACAGAGCTGCCATGGATGGGGGAAAGAGAAGGAACATGA 1146 0.4188 MYNKWLFGHTHMKMSLIHHQIQQKDGYLSYPPPVLPSSSPSYPDAFLRESMSSSSSPPSSGTRISPAVLFIIVILAVLFFVSGLLHLLVRFLIKHPSSSASTQSNRHHEISTSDVLQRQLQQLFNLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLSEFSEKDKLRLLPLCSHAFHISCIDTWLLSNSTCPLCRGTLFTPGLSMENPIFDFDDLREEDGYPCNIQNRFTSRQKNVEIEKTVEKGVFPVRLGKFRRLSVEAGEVAGGETSSSNLDARRCYSMGSYQYVLGNSDLRISLNHDDANLTKRTEHTEKLSIEGDLEAKKISSVSKGESYSVSKIWLWSKKGKFSSSSDTQMGLPLPSPLNTELPWMGEREGT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01649 381 SUPERFAMILY RING/U-box 135 204 - -
Bach1g01649 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 203 IPR013083 -
Bach1g01649 381 MobiDBLite consensus disorder prediction 352 381 - -
Bach1g01649 381 SMART ring_2 156 197 IPR001841 -
Bach1g01649 381 Pfam Ring finger domain 155 198 IPR001841 -
Bach1g01649 381 CDD RING-H2_EL5-like 155 198 - -
Bach1g01649 381 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 59 344 - -
Bach1g01649 381 ProSiteProfiles Zinc finger RING-type profile. 156 198 IPR001841 -
Bach1g01649 381 FunFam RING-H2 finger protein ATL46 118 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01649 Bach-Chr1 30054510 30055655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01649 53 356 C3H Transcription Factor Family AT2G18650 41.349 1.44e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01649 - - qsa:O6P43_004596 585.104