Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01647 ATGGGAGTCCACGGTCTTTGGGAACTTCTAGCCCCTGTAGGTCGCCGGGTTTCCGTCGAAACCCTTGCCGGGAAGAAGCTCGCCATTGATGCGAGCATATGGATGGTGCAGTTTATGAAGGCGATGCGGGACGAGAAGGGGGAGACGATTCGCAATGCACATTTGCTTGGCTTCTTCCGGCGAATTTGCAAGCTTTTATTCCTGCGGACCAAGCCTGTTTTCGTCTTTGATGGTGGCACTCCTGCTCTCAAGCGACGGACTGTACTTGCTCGTCGCAAGCAGCGGGAAATGGCTCAGGCGAAAGTTCGCAAAACTGCCGAGAAATTGCTTCTCAATCATTTGAAGGCATTGAAATTGAAAGAACTGGCAGATGATATTAAGAACCAGAGACTGAAGCAGAAGACTGATACTAAGGGTCAGAAAAAATCAGATCGGAGTTATTTAGGAAGAACTGATGTGAAAGAGCCAGATGAGATATCTGGCGATAAATTTGCAGCAGAAATGGAGAAAACTTTATCCCAGACAATGGCATCAAGAAGTTGTAATCAGGAAGAGCTTGATGAAATGTTGGCAGCATCTATGGTAGCAGAGGAAGGTGGAACTTTGGATGACATAGGAGTGGCATCTGCTGCTGTTAATCTTCCTGATAAGGAAGTTGATGCAGATGAAGAGATGATACTGCCAGTAGTTAATGCTGAAGTTGATCCAGCTGTGTTAGCTGCTTTGCCTCATTCAATGCAACTTGACATTCTTGCTCAGTATAAAGGAAGGAAAACAGAAGAGCTGGTGAAGGACATTGACAACCAGAAACATGAGGTCAGTGGTAAGGGAAAGGGTAAGGGAATTTTGACAGAAATTGACATGGTAGGATGTAGCTCAAGAAGTGATGATGCAGTGATATCCAGGAGTTACAATCAGGACAAAGTTGATGAAATGTTGGCTGCATCTATTGTGGCAGAGGAAAATGGAAAGTTGGAAAATAATGCTTCAGCCTCTGATGGGGCTTATACCTATGAGGAAGAGGATGAAAATTTTGATGAAGATGCAGAGATGATACTGCCAACAATGCATGGTGAAGTTGATCCAACTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTTGACCTTCTTGTTCAGATGAGAGAGCGGTTGATTGCAGAAAACAGACAGAAGTACCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCTGAGCTACAAATTCAAGCTTATCTTAAAACTGTTTCTTTCCGTCGGGAGATAGATCAAGTTCAGAAAACTGCTGCTGGGGGAGGAGTAGGTGGTGTACAGATTTCAAGGATCGCATCTGAAGCCAACAGAGAATATATTTTTTCTTCATCTTTTACTGGAGACAAACAAGAAATTACCTCTAATAGATTAGAGAAAGACAAAGGTAAGGAGAAAATGATGCAGGCAAGAAATCCTTCGCAGAATTTTGTGAAGAGCAAAGCTCCAGCCAATGATTCTAATTCTCCAAGCAAATCACTTGGTCATGAACCTGAAGGGCCTTTTGATGAGAGTGTCCAGACATATCTGGATGAGAGGATTCGGTTTCGAGTTAGTAGACCGAGAGCTCTGGGGATGCGTATGACCCGGGATATACAAAGGAATTTGGATATGATGAAGGAGATTGAGCAGGAGAGAAGAGATGTAAACAAGGAGGCAAATATTGACAACACGTTGCTGTATGCAGAGAGAGATGAGAGTGCATCACGAATTTCTGGCAACCAGCATGTTGGTGCATCACATGAAATAAATGCTGACTTTGTTGGAAAGCATATAGGAAATCAGCAACCTATGTTGGAAAGGGATACATCTATAAAGATATCCTTCAGAGATGATGGGGAAAATAAGTGTCTTGATGGGAATGATGATTTTTTTGCTAGTTTAGTAGCAGATAATTCAGGGACAATATTAAAAGAACAGCCCTCTGATCCTAATTCTGATAGTGATTGGGAGGAAGGAATAATTGAAGGTGAGAGTAACAATTTTTCTGGCAATGTTGGATTTGAAATGGGGCCTTCTGTTGCAAAAGATGATAATTGTGATGAGAGCGAAATAGAATGGGAAGGAGTTTGTGATGGTGCTAAAAGCACCGTATCCTATCCAGTTGAGTCATGTAAAGTGCCATCTCTGGGCTTCCTGGAAGAGGAGGCTGATTTGCGGGAGGCGATTAGGAGAAGTCTTGAGAGTAATGTAGATGGGGAACTTAAGTTGAAATCTTCTCTTGATGAGCATTCAGATGCTGATGAGGTCAAAGTAGATTATGCAGTACAGCGCAATGATAATTTGGTTGGTTCTGAAGTGAATGATTTTAATGATGATACTGAATTTCTGAATATAGAAAATGGTATGGATAGTTCCACTTTGCCAAGGGAAGTTGGTAATGAACAAAATGAATCATATCATCAATTTGACAGTGGAGATGAAAAGATAGATAACCTGATCAGTAACAACCCACAAACTTCTCATTCTACTGGGTATCAGTCAAAGTTATCTCTGGCATATCATTCTGGTAACAGGGAATTACTGACTAACAAGCCTTGCATAACAGACAAACGTTCTCATGCTGAAAATTCGTTGTCTGATGCAAATGAAAGGATGAAAAATGAGGTCAGTATGGTTGTAGAGCAATTCTTGGACTCATGTGGCAAGGATGGTATAGTTTCTACTAATGACAACAAGCCTCCTAACTTGAATTCCCTTGGTGCCACTGAAGAGGGGAAAAAGAATTACAATAATGAAGCTGAACCTTTGGGAATTTCTACTGAAATAACCAACCCTACTGCTCCTTTTGTGGAATCGTCCTTGAAAGGACCAACAGGAGACTTTAATGCTGGGTCAAAGTTGCCTAGAAAAGACAGTGATGGATCTTTTGTGGAAAGGAAGAGTGACCTGGGCAATGGTAAAGTTAAGGCCCCAAGAGATTTGCCTGCAGGTGCAGCTGACGTTATTCTGGAGGAAGAAATGCGAAAACTTGGTCAAGAATACATCAACTTAGAAAATGAGCATAGGAAGCTTGAACGTAACGCAGAATCTGTCAACAGTGAATTATTCACTGAATGTCAGGAACTACTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCAGAAGCACAGTGTGCTTATTTGGAACTTGCGAAACTGGTTGATGGTGTTGTGACTGACGACTCTGATGTCCTTTTATTTGGGGCACGTAGTGTCTACAAGAATATATTCGATGACCGCAAATATGTAGAAACATACTTCATGGAGGACGTTGAGAAGGAGCTTGGATTGACAAGGGAAAAATTGACACGCATGGCATTACTTTTGGGGAGTGATTATACTGAAGGTGTAAGTGGGATTGGCATTGTGAATGCTATTGAGGTTGTAAATGCATTTCCTGAGGAAGATGGCCTCCTGAAATTCCGGCAGTGGGTTGAGTCACCAGATCCCACCATCCTTGGAATGTTTGATGCAAAAAGTGGATCAAGTGCTAACAATAGGGGGTCAAAAGTTGAAGAAAATAAAGGGTGCTCAAATAGCAACGCAGAAGAGGCTCCATCAGACAAAAACATTTCCCATGCTCAGGAGCAAAAGGAGTCTTCAGATTATATCCAAGAAATAAATCAAACTTTCATGGATAAACATAGAAACGTAAGTAAGAATTGGCACATTCCTACTTCTTTTCCTAGTGAGACAGTTATATCTGCTTACTGTTGTCCACAAGTTGACAAGTCAACTGAGCCCTTCACATGGGGAAAGCCAGATCATCTTGTTCTTCGCAAATTGTGCTGGGAGAAGTTTGGATGGATCAGCCAGAAAGCAGATGAATTACTATTACCTGTTTTAAAGGAATATAACAAACATGAGACTCAATTGCGGTTGGAAGCATTTTACACTTTCAATGAAAGATTTGCAAAAATTCGTAGCAAGAGAATAAAGAAAGCTATAAAAGGAATCACCGGTAATCAGACTTCAGAATTGATAGATGATTCCGCAGAAGACCTGTCCAAGAGTAGGAAGAATGGGAGTAGTAGTTCTGTTGAACCTGGGAATAAAAAATCAGACACTTCAAAGGGAATAGAGCAGAATCTTTCTGCCATGAATAATTCGAAACTGAAACAGTCTGGGAAAAGGAAGATTGCTGGAGTTGCTGACGCTAAGATGCAGTCAGGGAAAAAGAGAAACACAAGCAATCCTGCTTCAGCTCCTGGCCTGTCCGAGGTGGAGAATTTGGAGCAATATATGCTGGCAGGAGAAGAGCAAAGTGATGGTAAGGCTTTGAATTGGAATAGAAGTGGTAGAGGTAAAGGTCGAGGTAGAGGTGTAGGAGTTGAAAGAGGAAAGAAAAAAGGAAGTCGTGGTTTTGAATCATGTGATACCACATCTATTGATGGTGAAAGTTATGATCATGAGCAGAGATTGAGTGTTGAGAAGTCAGAAGAGGGGCAGCAAGAGGTGCGAAGGTCAACGCGATCTCGGAAGCCTGTCACCTACTACATGAAGGACATTGAAACTGAAGATGATGAGTCATTTGATCTAAGCAATAATATATGTTCGAATGAAGAGGCAACTGAGGAAAATTTATCTTCCGTTCAGGATGCACGTGGAGATGCTACCACTGATTTCTTCGGAGAGAAACAAAGCAGTACAATTAATGTTTCTCTGAAGGAGGATTTGTCTAGACCTCATCTTGAGTCAGGAGGTGGGTTTTGCGCTGATGAAGGTGAAACCGATCATCCAGGAACCAGCAATTATGATAATTTGAAGGTTGATTCTTGTACAGACTCCCTTAAAATGGGAGGTGGGTTCTGTGAGGACGACAGGGAGACGGGTAACAATTATGACAACATTCATGGTGACGTTGCAGATACTGTGGATGAGGCTGACTATGATAATGAACTACGAGATACTGGGACAGCTTGTACATACAATATAGATCCGAATCTCAGCCATGTAGATGCTACAAGCAATCATGATAATGCTCACAACAATACTGAAAGTTCGACGGGAGGACTTTGTGCCATGCCCTTTTTGAGAAAAAAGAGGAGGAAGAGCTGA 5073 0.4187 MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGETIRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVLARRKQREMAQAKVRKTAEKLLLNHLKALKLKELADDIKNQRLKQKTDTKGQKKSDRSYLGRTDVKEPDEISGDKFAAEMEKTLSQTMASRSCNQEELDEMLAASMVAEEGGTLDDIGVASAAVNLPDKEVDADEEMILPVVNAEVDPAVLAALPHSMQLDILAQYKGRKTEELVKDIDNQKHEVSGKGKGKGILTEIDMVGCSSRSDDAVISRSYNQDKVDEMLAASIVAEENGKLENNASASDGAYTYEEEDENFDEDAEMILPTMHGEVDPTVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVSFRREIDQVQKTAAGGGVGGVQISRIASEANREYIFSSSFTGDKQEITSNRLEKDKGKEKMMQARNPSQNFVKSKAPANDSNSPSKSLGHEPEGPFDESVQTYLDERIRFRVSRPRALGMRMTRDIQRNLDMMKEIEQERRDVNKEANIDNTLLYAERDESASRISGNQHVGASHEINADFVGKHIGNQQPMLERDTSIKISFRDDGENKCLDGNDDFFASLVADNSGTILKEQPSDPNSDSDWEEGIIEGESNNFSGNVGFEMGPSVAKDDNCDESEIEWEGVCDGAKSTVSYPVESCKVPSLGFLEEEADLREAIRRSLESNVDGELKLKSSLDEHSDADEVKVDYAVQRNDNLVGSEVNDFNDDTEFLNIENGMDSSTLPREVGNEQNESYHQFDSGDEKIDNLISNNPQTSHSTGYQSKLSLAYHSGNRELLTNKPCITDKRSHAENSLSDANERMKNEVSMVVEQFLDSCGKDGIVSTNDNKPPNLNSLGATEEGKKNYNNEAEPLGISTEITNPTAPFVESSLKGPTGDFNAGSKLPRKDSDGSFVERKSDLGNGKVKAPRDLPAGAADVILEEEMRKLGQEYINLENEHRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDVEKELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTILGMFDAKSGSSANNRGSKVEENKGCSNSNAEEAPSDKNISHAQEQKESSDYIQEINQTFMDKHRNVSKNWHIPTSFPSETVISAYCCPQVDKSTEPFTWGKPDHLVLRKLCWEKFGWISQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAIKGITGNQTSELIDDSAEDLSKSRKNGSSSSVEPGNKKSDTSKGIEQNLSAMNNSKLKQSGKRKIAGVADAKMQSGKKRNTSNPASAPGLSEVENLEQYMLAGEEQSDGKALNWNRSGRGKGRGRGVGVERGKKKGSRGFESCDTTSIDGESYDHEQRLSVEKSEEGQQEVRRSTRSRKPVTYYMKDIETEDDESFDLSNNICSNEEATEENLSSVQDARGDATTDFFGEKQSSTINVSLKEDLSRPHLESGGGFCADEGETDHPGTSNYDNLKVDSCTDSLKMGGGFCEDDRETGNNYDNIHGDVADTVDEADYDNELRDTGTACTYNIDPNLSHVDATSNHDNAHNNTESSTGGLCAMPFLRKKRRKS 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01647 1690 SUPERFAMILY PIN domain-like 2 1117 IPR029060 -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 461 476 - -
Bach1g01647 1690 Coils Coil 540 560 - -
Bach1g01647 1690 CDD PIN_XPG_RAD2 2 99 - -
Bach1g01647 1690 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Bach1g01647 1690 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Bach1g01647 1690 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Bach1g01647 1690 MobiDBLite consensus disorder prediction 477 502 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 130 156 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 853 871 - -
Bach1g01647 1690 FunFam DNA repair protein UVH3 984 1101 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 894 920 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1424 1498 - -
Bach1g01647 1690 Gene3D - 977 1101 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 460 511 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 852 871 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 894 914 - -
Bach1g01647 1690 Gene3D - 1 145 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 960 976 - -
Bach1g01647 1690 CDD PIN_XPG_RAD2 1010 1103 - -
Bach1g01647 1690 CDD H3TH_XPG 1105 1249 - -
Bach1g01647 1690 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Bach1g01647 1690 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Bach1g01647 1690 SMART xpgn3 1 98 IPR006085 GO:0004518
Bach1g01647 1690 Coils Coil 989 1023 - -
Bach1g01647 1690 FunFam DNA repair protein UVH3 1 147 - -
Bach1g01647 1690 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1102 1311 IPR036279 -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1160 1204 - -
Bach1g01647 1690 Pfam XPG N-terminal domain 1 96 IPR006085 GO:0004518
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1468 1498 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1443 1460 - -
Bach1g01647 1690 Gene3D - 1102 1165 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1395 1409 - -
Bach1g01647 1690 Gene3D - 222 260 - -
Bach1g01647 1690 FunFam DNA repair protein UVH3 1102 1159 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1571 1592 - -
Bach1g01647 1690 SMART HhH_4 1104 1137 IPR008918 GO:0003677|GO:0003824
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1163 1193 - -
Bach1g01647 1690 SMART xpgineu 1033 1102 IPR006086 GO:0004518
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1664 1690 - -
Bach1g01647 1690 Pfam Ubiquitin binding region 230 254 IPR025527 -
Bach1g01647 1690 Pfam Ubiquitin binding region 359 384 IPR025527 -
Bach1g01647 1690 Pfam XPG I-region 1036 1117 IPR006086 GO:0004518
Bach1g01647 1690 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Bach1g01647 1690 ProSitePatterns XPG protein signature 2. 1036 1050 IPR019974 GO:0016788
Bach1g01647 1690 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 257 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1343 1380 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 1336 1411 - -
Bach1g01647 1690 MobiDBLite consensus disorder prediction 937 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01647 Bach-Chr1 30037807 30047835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01647 1027 1134 Core DNA Replication Machinery Family AT5G26680 35.135 3.63e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01647 K10846 - gmx:100820295 1834.69