Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01624 ATGATGCTCGGAGAACCCCATCGTCTAAATCCAACGGTTCACGTTCCTCCGTGGTCGGTGCTTGATGATCAGACGCTGGAGATGTACTCTCCTTACCCTGTCAGCGGTGTCTCCGTCAATTCCGACGGCAATGCCAACGGGGGTGATTATTCTCCTTATTTCTTGCACGAAGAACTGACTTCGCTTCAGCGTTATCTACCGTCAAATGAAGCGGATTTGGACTCGGACTCTGAGATTCTGGGTCGTGAGTCGGATTCTCCGGTGGATGCCTATTCCTGCGACCATTTCCGGATGTTCGAGTTTAAAGTGAGGAGGTGCGCACGTGGCCGGTCACATGACTGGACCGAGTGTCCATATGCTCATCCCGGCGAGAAGGCTCGCCGGCGGGACCCGAGGAAGTACCACTATTCTGGTTCTGCATGCCCTGATTTTCGCAAGGGAAATTGCAAGAAAGGGGATGCGTGTGAGTTCGCCCACGGGGTGTTTGAGTGTTGGCTTCACCCGGCTCGCTATCGTACGCAGCCATGCAAGGACGGGACTAGTTGCCGGAGAAGGGTGTGCTTCTTTGCTCACACGCCGGAGCAACTGCGAGTGCTACCTCAGCAGAGTCCTAGGAGTGTTAACTCGTCAGATTCCTATGATGGGTCTCCTCTAAGACAGGCGATTGAGTCTTCTTGTGTGAAAGCACTGCCTTTCATGTCTTCTCCTCGCTCGATTTCCCCACCTACTTCGCCTCCCACGGAGTCCCCTCCTATGTCGCCGATGACACAGTCTCTGAGCCGCTCTCTGGGTTCGAGCTCCGTCAATGAGATGGTGGCTTCTCTGCGTAACTTGCAGCTTGGTAAGGTTAAATCGTTACCCTCCTCCTGGAATGTTCAACTGGGATCGCCCTGTTTTGGATCTCCCAGAGGATCGGTGCTCCGACCTGGATTCTGTAGCCTCCCTTCTACCCCTACTCAGGTACCAACTCGTTCTGGTATTAACTGCTTTGACATATGGGAGGAGAGTTGTGAGGAGGAGCCTGCGATGGAGAGAGTGGAGTCTGGAAGGGATATACGTAAGATGATGTTCGAAAAATTAAGCAAAGAGAATACTCTGGATCGACCCTACCCAAAGTCAAGTGGTGCTCCGGATGTTGGGTGGGTGTCGGAGCTGTTGAAATGA 1164 0.5318 MMLGEPHRLNPTVHVPPWSVLDDQTLEMYSPYPVSGVSVNSDGNANGGDYSPYFLHEELTSLQRYLPSNEADLDSDSEILGRESDSPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCKKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSVNSSDSYDGSPLRQAIESSCVKALPFMSSPRSISPPTSPPTESPPMSPMTQSLSRSLGSSSVNEMVASLRNLQLGKVKSLPSSWNVQLGSPCFGSPRGSVLRPGFCSLPSTPTQVPTRSGINCFDIWEESCEEEPAMERVESGRDIRKMMFEKLSKENTLDRPYPKSSGAPDVGWVSELLK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01624 387 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 160 IPR000571 GO:0046872
Bach1g01624 387 MobiDBLite consensus disorder prediction 238 252 - -
Bach1g01624 387 SMART c3hfinal6 170 193 IPR000571 GO:0046872
Bach1g01624 387 SMART c3hfinal6 135 161 IPR000571 GO:0046872
Bach1g01624 387 FunFam Zinc finger CCCH domain-containing protein 66 93 161 - -
Bach1g01624 387 Gene3D - 136 199 - -
Bach1g01624 387 MobiDBLite consensus disorder prediction 233 265 - -
Bach1g01624 387 ProSiteProfiles Zinc finger C3H1-type profile. 136 162 IPR000571 GO:0046872
Bach1g01624 387 MobiDBLite consensus disorder prediction 363 387 - -
Bach1g01624 387 PANTHER UNKEMPT FAMILY MEMBER 55 387 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01624 Bach-Chr1 29854949 29856112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01624 91 199 C2H2 Transcription Factor Family AT5G12850 72.477 7.75e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach1g01624 zf-CCCH 3.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01624 - - qsa:O6P43_003933 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01624 1 29854949 29856112 Bach1g01624 1 29854949 29856112 ECH