Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01620 ATGAAGATCGAGGAATTGGACGATGTGGAATCCAGTGCGGACGAACAGAATCATGATAAACAGATTGTGAGTGTTGACACAAAGAGGGCATTAGTTGGAGCTGGTGCCCGGATTCTGTTTTACCCGACACTTTTGTATAATGTACTTCGAAATAAGATGGAATCTGAGTTCAGGTGGTGGGACGAAGTCGATGAGTATTTATTGCTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGTCTGAAGAAACTTGGCGTCGGTGGTGTAATTACTCTTAATGAACCGTATGAAACATTAGTGCGATCGTCATTATATCATGCTCATGGAATTGATCATTTAGTGATTCCTACGAGAGATTATCTCTTTGCTCCTTCATTTGTGGATATTAGCCGGGCTGTGCAATTTATTCATCAGAATGCAAGCTGTGGCAAAACTACTTATGTTCATTGTAAAGCTGGGAGGGGAAGGAGTACTACAGTTGTGCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCCGCTTTGGAATATGTGCGGTCTCGAAGACCCAGAGTGCTACTTGCACCATCTCAGTGGAAGGCTGTTCGAGAGTATAGCAATCGCCGACCTTCTCCAACACCTTATTCTCCCTCTGGTGATGCAGTTCTTATAACCAAAGCTGATCTTGAGGGTTATCATAGCGCATATGATGCTGGGATGGAGCTGGCCATTTTTCCCAAAGTGCCAAAGAGAAAAACAAAACCCATGATTGCAAGACTATCTTGCCTGTTTGCATCATTGAAAGTTTCTGGTAGTGGTGTTCCAGTAAATAGGCGGCTGCCAGTTCCTGAAGCACGTGCTTGCTAAAGCCAGCTTGACAAGTCGAGTTGGTGGCCTGTACAGAAGTCAGTTGATCACTGGAATAACTAGAAGTTGGATCACTGTCTC 933 0.4427 MKIEELDDVESSADEQNHDKQIVSVDTKRALVGAGARILFYPTLLYNVLRNKMESEFRWWDEVDEYLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVRSSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNASCGKTTYVHCKAGRGRSTTVVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVREYSNRRPSPTPYSPSGDAVLITKADLEGYHSAYDAGMELAIFPKVPKRKTKPMIARLSCLFASLKVSGSGVPVNRRLPVPEARAC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01620 283 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Bach1g01620 283 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Bach1g01620 283 CDD PTPMT1 59 203 IPR044596 GO:0004721
Bach1g01620 283 Pfam Dual specificity phosphatase, catalytic domain 82 202 IPR000340 GO:0008138|GO:0016311
Bach1g01620 283 FunFam Dual specificity phosphatase domain protein 59 206 - -
Bach1g01620 283 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Bach1g01620 283 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 261 - -
Bach1g01620 283 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Bach1g01620 283 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 201 IPR029021 -
Bach1g01620 283 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01620 Bach-Chr1 29786608 29788540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01620 21 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.610 9.05e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01620 - - gmx:100817410 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01620 1 29786608 29788540 Bach1g01620 1 29786608 29788540 ECH