Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01612 AAAATGCCATTAAAGCAATTGAAGCTCGCAGTTCCTGCTCAAGAAATCCCTATTACCTCTTACCTGACTGCAAGTGGTACATTTCACGATGGAGATCTGCTCTTGAACCACAAAGGATTGCGGCTCATTTCCGAAGAAAAAGAATCACGCCCTTCTGATGTCAAGGAGTTTGATTTTGATTTCTCACTGGAAGATCTTGAGACCATCAAAGTGATTGGAAAAGGCAGCGGTGGTGTAGTACAACTTGTTCGCCATAAGTGGGTTGGAAAATTATTTGCTTTGAAGGTCATTCAGATGAACATACAAGAGGAGATCAGAAAACAGATTGTGCAGGAGCTGAAAATAAACCAATCATCACAGGGCCCACATGTTGTAGTTTGCTACCACTCTTTCTATCATAATGGAGCTATATCACTTGTGTTAGAATACATGGATCGTGGTTCTCTGGCAGACGTGATTAGACAGGTTAAAACAATTCTGGAACCATATCTTGCTGTTGTTTGTAAGCAGGTCTTGCAAGGTCTTGTTTACTTGCATCATGAAAGACATGTAATACATAGAGACATCAAACCATCTAACTTATTGGTAAATCACAAAGGGGAAGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGTTCAATGGGCCAGAGAGATACATTTGTTGGAACTTACAACTACATGTCGCCAGAAAGGATCAGTGGGAGTACTTATGATTACAGCAGTGACATCTGGAGTTTGGGCATGGTAGTACTTGAATGTGCCATAGGACGGTTTCCTTATATAGAATCAGAAGATCAGCAAAGCTGGCCTAGCTTCTATGAGCTTTTGGCAGCAATTGTGGAAAGCCCACCACCTTCTGCTCCATCAGATCAGTTCTCTCCTGAGTTCTGTTCGTTTGTGTCATCCTGCATACAAAAGGATCCTCGGGATAGACTGACATCCTTGGAACTTCTGGAACATCCTTTCATAAAAAAGTTTGAAGACAAAGACCTAGATCTTGAGATTCTCGTAGGTAGCTTGGAGCCCCCTGTAACTATTCCCAGATAG 1056 0.4186 MPLKQLKLAVPAQEIPITSYLTASGTFHDGDLLLNHKGLRLISEEKESRPSDVKEFDFDFSLEDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEEIRKQIVQELKINQSSQGPHVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYIESEDQQSWPSFYELLAAIVESPPPSAPSDQFSPEFCSFVSSCIQKDPRDRLTSLELLEHPFIKKFEDKDLDLEILVGSLEPPVTIPR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01612 350 Pfam Protein kinase domain 66 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01612 350 FunFam Mitogen-activated protein kinase kinase 6 35 144 - -
Bach1g01612 350 Gene3D Phosphorylase Kinase; domain 1 38 144 - -
Bach1g01612 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 22 327 - -
Bach1g01612 350 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Bach1g01612 350 FunFam Mitogen-activated protein kinase kinase 6 146 344 - -
Bach1g01612 350 SUPERFAMILY Protein kinase-like (PK-like) 63 344 IPR011009 -
Bach1g01612 350 CDD PKc_MAPKK_plant_like 63 329 - -
Bach1g01612 350 ProSiteProfiles Protein kinase domain profile. 65 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01612 350 SMART serkin_6 65 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01612 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Bach1g01612 350 Gene3D Transferase(Phosphotransferase) domain 1 146 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01612 Bach-Chr1 29737851 29740958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01612 3 350 MAP Kinase Kinase Gene Family AT5G56580 87.106 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bach1g01612 Pkinase 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01612 K04368 - gmx:100792457 651.744