Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01589 ATGGCTGAGCTACCAAGCTCAGAGGCAGAGATAACTAGTGCTAACTGCTTCCCACAGTCTCCATCTTCACCGTCATCATCTGGGTCTGGATTATCTCAGTCAGTGCCTAACACTACTTCTAAAACCGACCCAGAAGTGGGAGAGAGGAAGGCCAAGCGAGCTAGAGATAGTAGCAAGCACCCAGTTTACAGAGGAGTCCGAATGCGGACATGGGGCAAGTGGGTATCCGAAATCCGCGAGCCCCGCAAGAAGAATAGGATCTGGCTAGGCACCTTCGCCACGCCGGAGATGGCAGCTCGTGCCCATGACGTGGCCGCACTCAGTATTAAAGGCACCTCAGCCATCCTCAACTTCCCCCAACTAGCGGGTTCTCTGCCCCGACCCGCTTCTAACTCGCCACGTGATGTTCAAGCTGCCGCCGCAAAAGCCGCTGCTATGGAAATACGTAACCCGACAACGACGTCTTCACCGTCCCCGTCTCCTTCTTCCTCGTCATCGTCGTTGTCCTTTTCTCAGTCTTCTTCCACTTCGTCATTGGCAATATCTTGCTCCGACGACCCGTCGACCCCAGAAGAACTCGGTGAGATAGTGGAGCTCCCGGTTCTTGGAACCAGCTTCGAATCGCCCGACCCGACTAACGATTTCGTATTCGTTGACCCGGTAGATGGGTGGCTCTATCCTCACCCGTGGTATCACACCATTTATGATGACAAGGATTGTGGTTACTATCTCACTGCGGATCAGACATCAATGCAAGAGGCAGAGAGTTTGATTCTTTGTGGCTTTGAGTGTTCATTGTGGCAACCTTAA 810 0.5296 MAELPSSEAEITSANCFPQSPSSPSSSGSGLSQSVPNTTSKTDPEVGERKAKRARDSSKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALSIKGTSAILNFPQLAGSLPRPASNSPRDVQAAAAKAAAMEIRNPTTTSSPSPSPSSSSSSLSFSQSSSTSSLAISCSDDPSTPEELGEIVELPVLGTSFESPDPTNDFVFVDPVDGWLYPHPWYHTIYDDKDCGYYLTADQTSMQEAESLILCGFECSLWQP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01589 269 CDD AP2 63 119 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
Bach1g01589 269 MobiDBLite consensus disorder prediction 43 63 - -
Bach1g01589 269 MobiDBLite consensus disorder prediction 148 171 - -
Bach1g01589 269 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Bach1g01589 269 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 MobiDBLite consensus disorder prediction 1 63 - -
Bach1g01589 269 MobiDBLite consensus disorder prediction 8 42 - -
Bach1g01589 269 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Bach1g01589 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 204 - -
Bach1g01589 269 FunFam Ethylene-responsive transcription factor 2 61 120 - -
Bach1g01589 269 MobiDBLite consensus disorder prediction 126 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01589 Bach-Chr1 29521746 29522555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01589 35 241 AP2-EREBP Transcription Factor Family AT5G11590 60.000 2.13e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach1g01589 AP2 9.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01589 K09286 - qsa:O6P43_007884 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01589 1 29521746 29522555 Bach1g01589 1 29521746 29522555 BWGD
Bach1g01589 1 29521746 29522555 Bach1g01589 1 29521746 29522555 ECH