Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01563 ATGCCGTCGCTCTCTATTCTCCTCCAACTGCCCTTGTCTCAAAATCCTCACTTTGAGCAAACCCAGCTCTTTAAACCCATCAAAATTCACAATCTGCATCCAAATTCAAGTTCAACGAATCCTTTATCAACAGCCCTTCACCCCTTCTCCCGCCTTCGCAAATCCTCTAATACTAGTAGTCTTCCCTTTAGGATCCAAAACCATAGGACCCACTCTCGGAGGAATAGCTGCAATGTTTTTAAGGATTCTGACGAAGAAACTAAGGTAGTCTTAGACTCAGATGACGGGGATGATGGTGGAGGTGGCGGCGGCGGTGATGGAGGTGAAGGTGATGGGCAGGTGGAAAAAAAAGATGGTTCTTCAGGGCCTTTGCCGGATTGGTTGAATCTTACTTCTGATGACGCAAAGACGGTCTTTGTGGCACTCGCAATATCGCTTGCGTTTCGGTCGTTCGTGGCCGAACCGAGGTTCATTCCTTCGTTGTCAATGTTTCCTACATTTGATGTTGGAGATCACATTGTTGCAGAAAAGGTAGTTTCGTACTACTTCAGAAAGCCATGTCCAAATGACATAGTGATATTTAAAAGTCCACCAGCCCTTCAAGATGTTGGATACACTGACGATGATGTTTTCATAAAACGAGTGGTTGCAAAGCAAGGTGATATTGTTGAAGTTCGTAAAGGGCATCTCATAGTTAATGGCGTTGAGAGAAATGAAAATTTCACCTATGAACCACCTTCTTATGACATGAAACCTATACGTGTACCAGAGAACCATGTGTTTGTCATGGGAGATAACCGCAATAATAGCTACGATTCGCATGTGTGGGGTCCCTTGCCAGCCAAGAATATTATAGGGAGATCAGTTCTTCGCTATTGGCCACCAAACAGGATTGGCGGCACAGTTCTAGAGGGAGGTTGTGCTGTCGAGAACAAGCAGGAGACTAGTCTAGCATCTCAATGA 963 0.4507 MPSLSILLQLPLSQNPHFEQTQLFKPIKIHNLHPNSSSTNPLSTALHPFSRLRKSSNTSSLPFRIQNHRTHSRRNSCNVFKDSDEETKVVLDSDDGDDGGGGGGGDGGEGDGQVEKKDGSSGPLPDWLNLTSDDAKTVFVALAISLAFRSFVAEPRFIPSLSMFPTFDVGDHIVAEKVVSYYFRKPCPNDIVIFKSPPALQDVGYTDDDVFIKRVVAKQGDIVEVRKGHLIVNGVERNENFTYEPPSYDMKPIRVPENHVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRIGGTVLEGGCAVENKQETSLASQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01563 320 ProSitePatterns Signal peptidases I serine active site. 160 167 IPR019756 GO:0004252|GO:0016020
Bach1g01563 320 Gene3D Umud Fragment, subunit A 148 304 - -
Bach1g01563 320 FunFam Peptidase/ serine-type peptidase 160 292 - -
Bach1g01563 320 Pfam Signal peptidase, peptidase S26 135 293 IPR019533 GO:0004252|GO:0006465
Bach1g01563 320 CDD S26_SPase_I 154 287 IPR019533 GO:0004252|GO:0006465
Bach1g01563 320 PRINTS Bacterial leader peptidase 1 (S26A) family signature 255 274 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach1g01563 320 PRINTS Bacterial leader peptidase 1 (S26A) family signature 211 223 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach1g01563 320 PRINTS Bacterial leader peptidase 1 (S26A) family signature 151 167 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach1g01563 320 PANTHER SIGNAL PEPTIDASE I 123 299 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach1g01563 320 MobiDBLite consensus disorder prediction 53 125 - -
Bach1g01563 320 SUPERFAMILY LexA/Signal peptidase 149 301 IPR036286 -
Bach1g01563 320 NCBIfam signal peptidase I 136 295 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach1g01563 320 ProSitePatterns Signal peptidases I signature 3. 260 273 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01563 Bach-Chr1 29289033 29291734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01563 163 294 MADS-box Gene Family AT1G29960 30.303 5.18e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01563 K03100 - qsa:O6P43_004025 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01563 1 29289033 29291734 Bach1g01563 1 29289033 29291734 ECH