Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01562 GGGAATTCCACTTTAACTTGGAAAGTTTCGAAATTGATTCTTTGTTCTGATACTTTTTTTGGGCAATGTCAACAACGCCGTCTCCCGGAGCTGCTCCGGCACCCACTCCTCCGCCGCCCGCCAACATTACTTCTCCTCCGCCGGCGATTCCTTCTGCACCGGCTCCATCAACACCGGCTACGCCAACTCCTAGTCCTCCCTCTCCCTCACCTCCTTCACCCTCCACGCCATCAGCCTCACCCCCGCCTCCGTCTACGTCTACTCCCACTCCACCTAGTCCTGCGTCGAGGAGCTCCCCGCCACCTCCCTCAAGCTCAGGCTCGCCTTCACCTCCGAATCGAAGCTCGCCTCCGCCTCCTCCTTCGTCAACATCGCCGTCATCTTCATCGTCGGGGCTACCAACTGGAGTCATCATCGGAATCGCCGCTGGGGCTGTAGCGGTTCTTTTAGTGTTGAGTATTTTGTGCATATGTGGTAGGAAGAAAAAGAGAAGACGTGATGAGGGATACTATGCACCACCACCACCACGGGGGACTAAAGTCGACCCATATGGTGGCCCACCTCGTCAGTGGCAGCATAATGCTCCCCCTCCTTCTGATCAAGTTGTCTCTGTGATGCCAAAGCCAACGCCTCCACCACCAGTTGCACCGCGACCACAGCCATCACCGGTTTATGTTCCTCAACCCCCACCCCCACCTTTCTTGAGCAGCAGTGGTGGTTCTGGCTCCAACTACTCTGGTTCTGAAAATCCACTTCCGCCTCCTTCTCCAGGCCTTTCATTGGGTTTTTCAAAGAGCACATTTGCGTATGAGGAGTTGGCACGGGCAACTAATGGCTTCTCTGATGCCAACTTACTTGGACAAGGTGGATTTGGGTATGTGCACAAAGGAATTCTTCCAAACGGAAAGGAGGTAGCTGTCAAGCAGCTAAAGGCTGGAAGTGGACAAGGGGAACGTGAATTTCAAGCTGAAGTAGAAATAATTAGCCGAGTTCATCACAAGCATCTTGTTTCTTTGGTTGGATATTGCATTACTGGGTCTCAGAGGCTGCTTGTTTATGAATTTGTCCCAAACAATACATTAGAGTTCCACTTACATGGAAAAGGGCGACCTACCATGGATTGGCCCACAAGACTAAAAATTGCTTTAGGATCTGCTAAAGGATTGGCATATCTTCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAATATACTTCTGGATTTTAACTTTGAAGCAAAGGTTGCAGATTTTGGACTTGCAAAGATTTCTTCTGACATCAATACTCATGTCTCCACTAGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATACGCTTCAAGTGGAAAACTCACTGACAAATCAGATGTATTTTCCTTTGGAGTTATGCTCCTGGAGTTAATTACTAGACGGCGACCAGTTGACTCAAGTCATACTTTCATGGAGGATAGCTTGGTAGACTGGGCAAGGCCTGTGCTCACACGTGCTTTGGAAGATGAGAATTTCGATTCTCTGGTTGATCCAATGCTCCAAAATGAATATGACCACAATGAGATGGCTCGCATGATAGCATGCGCTGCAGCTTGCATACGTCATTCAGCACGTCGTCGACCAAGGATGAGCCAGGTTGTTCGTGCTCTAGAAGGAGATATGTCTCTGGCCGATCTTAACGAGGGAATTAAACCTGGACACAGCACTGTGTACAGTTCTCATGGAAGCTCAGATTATGACACTTCACAGTACAAGGAGGACATGAAAAAGTTCAGGAAAATGGCATTGGGGGGAACTCAGGAGTATGGCACCAGCAGCGTACACAGTGCACCCACAAGTGAGTATGGTTTATACCCATCTGGTTCAAGCAGTGAAGGCCACACCACCAGGGAAATGGAAATGGGAAAAGTGAAGAATAGTCAAGGTTTCAGTGGAGGCTCTTGACAACGCTCATTTATCCTGTATAAATCTATATCATAGAGTTCACACTTTTGTCAACATTTGCTTGCAAAACTAACATCTTGTGAGTGATCTATCACTTTTTTTTTTTTCCCACAAATTATCAACTTTTTTCTTCAAACGCTGTATCTAT 2100 0.4776 MSTTPSPGAAPAPTPPPPANITSPPPAIPSAPAPSTPATPTPSPPSPSPPSPSTPSASPPPPSTSTPTPPSPASRSSPPPPSSSGSPSPPNRSSPPPPPSSTSPSSSSSGLPTGVIIGIAAGAVAVLLVLSILCICGRKKKRRRDEGYYAPPPPRGTKVDPYGGPPRQWQHNAPPPSDQVVSVMPKPTPPPPVAPRPQPSPVYVPQPPPPPFLSSSGGSGSNYSGSENPLPPPSPGLSLGFSKSTFAYEELARATNGFSDANLLGQGGFGYVHKGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFNFEAKVADFGLAKISSDINTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITRRRPVDSSHTFMEDSLVDWARPVLTRALEDENFDSLVDPMLQNEYDHNEMARMIACAAACIRHSARRRPRMSQVVRALEGDMSLADLNEGIKPGHSTVYSSHGSSDYDTSQYKEDMKKFRKMALGGTQEYGTSSVHSAPTSEYGLYPSGSSSEGHTTREMEMGKVKNSQGFSGGS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01562 628 MobiDBLite consensus disorder prediction 1 113 - -
Bach1g01562 628 FunFam proline-rich receptor-like protein kinase PERK1 236 333 - -
Bach1g01562 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Bach1g01562 628 Pfam Protein tyrosine and serine/threonine kinase 263 531 IPR001245 GO:0004672|GO:0006468
Bach1g01562 628 SMART serkin_6 258 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01562 628 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 587 IPR047117 -
Bach1g01562 628 CDD STKc_IRAK 264 533 - -
Bach1g01562 628 SUPERFAMILY Protein kinase-like (PK-like) 233 531 IPR011009 -
Bach1g01562 628 FunFam Proline-rich receptor-like protein kinase PERK1 334 542 - -
Bach1g01562 628 MobiDBLite consensus disorder prediction 582 628 - -
Bach1g01562 628 MobiDBLite consensus disorder prediction 8 103 - -
Bach1g01562 628 MobiDBLite consensus disorder prediction 140 237 - -
Bach1g01562 628 ProSiteProfiles Protein kinase domain profile. 258 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g01562 628 Gene3D Transferase(Phosphotransferase) domain 1 334 542 - -
Bach1g01562 628 ProSitePatterns Protein kinases ATP-binding region signature. 264 286 IPR017441 GO:0005524
Bach1g01562 628 Gene3D Phosphorylase Kinase; domain 1 238 333 - -
Bach1g01562 628 MobiDBLite consensus disorder prediction 582 609 - -
Bach1g01562 628 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01562 Bach-Chr1 29279654 29283415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01562 73 578 Trihelix Transcription Factor Family AT1G70460 51.953 1.65e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bach1g01562 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01562 - - qsa:O6P43_007923 802.357