Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01555 ATGGAGCAGAACAACAACGTCATCGCTCCGTTCGTTATAAAGACTTATCAGATGGTCAGCGATCCCTCCACTGATAATCTCATCATTTGGAGCGGAGCCAATAACAGCTTCATCGTCCTCGACCCCTTAGATTTCTCTCAGCGAATCTTACCTGCCTATTTCAAGCACAACAACTTCTCAAGCTTCGTTCGTCAGCTCAACACCTATGGGTTCAGAAAGGTTGATCCAGATCGGTGGGAGTTTGCGAACGAGTGGTTTCTTCGAGGGCAGAAGCATTTGTTGAAGAATATTGTGAGGAGGAAGCACGTAAGTAGTAAGAATTCCAATTCGTATTTTCAGGGGAAGAACGAGGAACTGGACGAGGAAGCCATAATGATGGAGATAGCGAGGTTGAAGGAAGAGCAGAAGGCTATGGAGCAAGAGCTTCAAGGGATGAATCGGCGGTTAGAGGCTACAGAGAGACGACCACAGCAAATGATGGCCTTTCTCTGCAAAGTTGCCGACGACCCAGATGTTCTTTCTCGGATATTGGTCGAGAGAGACAAGAGGCAATTGCCAGGGGAGAAGAAGAGGCGTTTCCTATCCCCACCAACCACTTCCTCCTCCTCTTCCTCGGGTATGGCCGTCAAGACGGAGCTTGACGACGACGAACCGGCTGTCCTTGGTGGTCTAATCTCTTCATCGTCGCCGGAGACTGGTTTTGAAGTTGACAATTTCTGCCAATCATCATCGTCCGACGACACAATCGCCGCCAGCAATATCATGCCCGTCACCGCTTGTTGGAGTGATGATAGGTATACTATAATGGGTAGGCCTCAGAGTGCTCAACAGGCTTATAATTGGGATGCTATTCCCGCTCCGTTACCGGCGATGACGACGCCTCTTGGGTGTGAAAATACTAGCAAGGGACAAGCAACCTATTTTACAGAAATGGCGGCGGGGACGGCGAGTAGTCACCGGCCGCCTTATCCATTTTCGCTGTTGGAGGGTGGCTTTTAG 999 0.4985 MEQNNNVIAPFVIKTYQMVSDPSTDNLIIWSGANNSFIVLDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRRKHVSSKNSNSYFQGKNEELDEEAIMMEIARLKEEQKAMEQELQGMNRRLEATERRPQQMMAFLCKVADDPDVLSRILVERDKRQLPGEKKRRFLSPPTTSSSSSSGMAVKTELDDDEPAVLGGLISSSSPETGFEVDNFCQSSSSDDTIAASNIMPVTACWSDDRYTIMGRPQSAQQAYNWDAIPAPLPAMTTPLGCENTSKGQATYFTEMAAGTASSHRPPYPFSLLEGGF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01555 332 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 216 IPR027725 -
Bach1g01555 332 MobiDBLite consensus disorder prediction 194 209 - -
Bach1g01555 332 MobiDBLite consensus disorder prediction 187 210 - -
Bach1g01555 332 Coils Coil 121 155 - -
Bach1g01555 332 Gene3D - 3 101 IPR036388 -
Bach1g01555 332 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01555 332 FunFam Heat stress transcription factor B-4 3 101 - -
Bach1g01555 332 SUPERFAMILY "Winged helix" DNA-binding domain 8 100 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01555 Bach-Chr1 29209420 29210541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01555 7 192 HSF AT3G24520 66.316 4.42e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach1g01555 HSF_DNA-bind 1.5e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01555 K09419 - qsa:O6P43_007930 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01555 1 29209420 29210541 Bach1g01555 1 29209420 29210541 ECH