Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01544 ATGAAGAAGGTCTTCTCAAACCCTCATTTACCTTTCGCGCTTGTCATTGCCTTGTTTCTGGGCACACTATCCCTCTGTGCCTCCCTCAATGAACCCAGCTTCAGCCATGGAAGTCTCACAGATGCAGAGGCCATGTACATCAGGCAACGCCAGCTTCTCTATTACAGGGATGAGTTCGGTGACAGAGGAGAGAATGTGACTGTAGACCCATCTCTCGTTTTCGAAAATGATCGTATCAAAGCTGCTTATATAGCTCTACAAGCTTGGAAGCAAGCTATTATTTCTGATCCGCAAAATCTTACTTTGAACTGGGTTGGATCCAACGTCTGTAACTACAACGGGGTTTACTGTACTCAGGCGCTGGACAACCCCAAGATCCGCACCGTCGCCGGCATTGATCTCAACCATGGTGACATTGCTGGTTATTTACCAGAGGAGCTTGGCTTACTCGTGGATCTTGCACTCTTCCATATCAACTCCAACAGGTTCTGTGGTACTGTGCCTCACAAGTTTGAGAAGCTGGTTCTGCTCTTTGAATTGGATATCAGTAACAACAGGTTCGCTGGTAAGTTCCCCGAGGTGGTTCTGAGGCTTCCCTCACTGAAGTTTTTGGATCTGAGATACAATGAATTTGAAGGGACTGTACCCAAAGAGCTCTTCGATAAGGATCTGGACGCGATCTTCATCAACGACAATCGTTTTGTATTTGATCTACCAGACAATTTCGGCAACTCTCCGGTTTCAGTCATAGTTCTTGCTAACAACAGGTTCCATGGCTGTATTCCAGCGAGTTTAGGCAACATGACAAATCTTAATGAGATTCTTTTCTTGAACAATAACTTTCGTTCCTGCTTGCCTTCTGAGATTGGGTTGCTCAAGAACGTGACAGTGTTCGATGTGAGCTTCAATGAGCTATTGGGTCCGTTGCCTAACGCCATTGGAGGCATGGTTAGCCTTGAGCAGTTGAATGTGGCTCACAATTTGCTTTCTGGAAAAATTCCTTCGAGTATTTGTTCGTTGCCCAATTTGGAGAACTTCACGTACTCGTATAATTTCTTCACCGGCGAACCTCCAACGTGCCTGAGCTTACCGGCGTTCGATGACAAGAGGAATTGCTTGCCGGGCAGGCCATTACAGAGGTCAGCAGCACAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGTAACTCATTTAAATGTGCCGCATCTAAACCCTCTCCGCCTTCGCCTCCGTTTATTCCTTCACCGCCTATTGTTGTACCGTCGCCACCTCCGCAAGTTTCACCTCCTCCACCGGTTAGCCTTCCACGGCCTCCACCTCCGCCACCGCCACCAGTGTCCTCTCCACCACCACCGCCGCCACCAGTATCCTCTCCGCCTCCACCACCAGTGTACTCTCCTCCTCCTCCTTCTCCCCCACCACCGTCGTATTCACCCCCTCCCCCACCGCCACCACCACCGGTGTACTCTCCACCGCCTCCACCTTCCCCTCCACCACCATCTCCATCACCACCTCCCCCATCTCCCCCACCACCTTCACCTCCACCACCGTCTCCATCACCACCTCCGCCATCTCCCCCACCACCTTCTCCGCCCCCTCCATCTCCACCACCACCCTCACCAATTCCAGCACCTCCATATTGTGTCCGGTCTCCACCACCGCCGCCTCCAAATTCACCACCACCACCAGCTCCAGTATTCTCCCCCCCTCCACCTACCCCTTATTATTATAATTCACCACCTCCGCCACAACACTCGCCTCCACCACCAACTCATTCACCTCCACCACCTCCGCACTCACCTCCACCACCTATTTATCCATATCTATCACCTCCGCCACCTCCTCCTGTCTATTCTCCTCCCCCACCAGTCCACTCCCCACCCCCACCATCTCCTCCACCTTGTATAGAACCACCCCCACCACCATGTGAAGAGCATTCACCCCCACCCCCACCGCCATCGCCTACTCCCACACCTTACCATGCACCACCTTCACCTTCACCCCCACCACCACCAGTATATTCTTCTCCACCTCCCCCAGTTCATTATAGTTCCCCATCTCCACCACCCCCACCTCCTATTCATTACAGCTCACCACCACCACCAGTTTATCATTCTCCCCCACCACCATCATCACCACCTCCATGTGAAAATCCACCGCCTTCTGCTTCTCCACCTCCACCAATTATATATGAAAGTCCACCACCTCCTGCCCCTGTATATGAAGGGCCTTTGCCACCTATCTTCGGAGTCTCATATGCATCTCCTCCTCCACCACCCTTCTATTGA 2289 0.5186 MKKVFSNPHLPFALVIALFLGTLSLCASLNEPSFSHGSLTDAEAMYIRQRQLLYYRDEFGDRGENVTVDPSLVFENDRIKAAYIALQAWKQAIISDPQNLTLNWVGSNVCNYNGVYCTQALDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFEKLVLLFELDISNNRFAGKFPEVVLRLPSLKFLDLRYNEFEGTVPKELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMTNLNEILFLNNNFRSCLPSEIGLLKNVTVFDVSFNELLGPLPNAIGGMVSLEQLNVAHNLLSGKIPSSICSLPNLENFTYSYNFFTGEPPTCLSLPAFDDKRNCLPGRPLQRSAAQCKSFLSKPVDCNSFKCAASKPSPPSPPFIPSPPIVVPSPPPQVSPPPPVSLPRPPPPPPPPVSSPPPPPPPVSSPPPPPVYSPPPPSPPPPSYSPPPPPPPPPVYSPPPPPSPPPPSPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPPPPSPIPAPPYCVRSPPPPPPNSPPPPAPVFSPPPPTPYYYNSPPPPQHSPPPPTHSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVHSPPPPSPPPCIEPPPPPCEEHSPPPPPPSPTPTPYHAPPSPSPPPPPVYSSPPPPVHYSSPSPPPPPPIHYSSPPPPVYHSPPPPSSPPPCENPPPSASPPPPIIYESPPPPAPVYEGPLPPIFGVSYASPPPPPFY 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01544 762 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 585 - -
Bach1g01544 762 Gene3D Ribonuclease Inhibitor 82 371 IPR032675 -
Bach1g01544 762 PRINTS Proline rich extensin signature 396 417 - -
Bach1g01544 762 PRINTS Proline rich extensin signature 417 433 - -
Bach1g01544 762 PRINTS Proline rich extensin signature 454 479 - -
Bach1g01544 762 PRINTS Proline rich extensin signature 435 452 - -
Bach1g01544 762 FunFam Leucine-rich repeat extensin-like protein 1 83 244 - -
Bach1g01544 762 FunFam Leucine-rich repeat extensin-like protein 5 245 384 - -
Bach1g01544 762 Pfam Leucine rich repeat N-terminal domain 85 117 IPR013210 -
Bach1g01544 762 SUPERFAMILY L domain-like 84 365 - -
Bach1g01544 762 MobiDBLite consensus disorder prediction 405 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01544 Bach-Chr1 29100463 29102751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01544 39 464 Leucine-rich Repeat extension Gene Families AT3G24480 74.005 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01544 - - qsa:O6P43_004046 699.508