Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01542 CAAGATCACCTTCACGTTTTCTACTCTTCAGCATTGGTTTCATTTGAGCTGAAGCCGAAATGGCAAATCGACTGAAGGAAGATGAAAAAAATGAAAGAATAATTCGAGGTCTTCTCAAACTTCCGGAGAATCGAAGATGTATTAACTGCAACAGCTTGGGACCACAATATGTGTGTACGAATTTCTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGGGAATTCACGCATCGTGTAAAATCAGTTTCAATGGCCAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATAAGCGAGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAGCGCCAGTCTTTCCCTGACAGCAGTAATGTTGACAGGCTCCGGGCATTTATTAAGCATGTTTACGTAGATAGAAGATTTAGTGGTGAGAGGGCCTATGACAAACCACCAAGAGTTGATACATATCAGGGGGGATCTAAAAGTCCTCCATATGAGGAAACATATGAACGCCGTCAAAGTGACCGGTCTAGTCCTGGTGGAAGAAGTTATGATGAGAGAAGAAGTCCTGGATATGATCAGGAAAGTAGGCAATATGGTGATTACAAGAGAAGTCCTGGTCGTCCCCCCATAGTCACAGATTGGCGCCGTGAAGATAGGTTTGGAGATCGTAGAATATCTGATGGAGACTATAAGCCAGAAGGGCAATCACCTGATCGAGCTAAAGATCTTGATTCTTCAAGTCCACCCGTGGTACAGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTTCCTCTTCGAATTAGTGAACCTCCTAAAGGGGGCAGCGGAAAGGCAGCTGATGGTTCTGTACTTACACAGAGAACTGCTTCTTCTAGTAGCTTGGCATCTAGCAATGGAAACCCAGTTGAAGTTAAGTTGGAGAGTTCTAAGAGCCTAATTGATTTTGATGCTGAGCTTGAACCTACAGCTGCTCCAGCAATTCCTCAAGCCCAACAAACTACTGTGGCTCAACCTCTTGTGCAGCCAGCAAATTCCAGTGGTGAAACCAACTGGGCTTCCTTTGATGTTGCTCCTGAGGCTAAAGCAAATCAAGGTCCTTCAAATGTAAATCCACTTGAATCTGTGCTATCGCAATTGTCAGTGTCGGAATCTGTACCTGCAGGGTACGTGGCATCAGGTCTTACCTCCAGTGCTGCTGGCTCGGCAAGTGTTAGCGGCCTCTCAACATTCCCACCAAGTGGTGCTTCAGTAACAGCTCCTGGATTAACAACGCTATCCCCTCTCAATGGTCCAGGCCAGTGGCACCGTATGCAGCATCAGCAACCTTTGTTCCCTGCTACTGTCAGCCAGTCTGCTACTCAACAACTTGCACCACTGGTAGGTGGAGCTTTGAGTAATCAGCTCTGGAATGTACCTCATGCTCCGGCAACACAAGGGCATCTGAGCATGCCAACACAACATACATCTCATCTTGTCTCAAAGCCTGCTAATGAGGCTACCTCGGAAGGAAAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTTTTTACTCTAAAGTATTCATCCTTCCCTTCCCCAGCCTCAGGGTGGCAAATGGGTCCTTCCTATGGCATGGGTATCCCAATGCAATATAATACTGTGGTGTCTATGCCAAGTTTTCCACAGTCATCAAAATCAACAAATCCATTTGATGTCAGCAGCATGCCACATCCAGTACAAGCCCCAACATTTCCTTCCATGTCATCATTGCAAGGTGCTTTGCCTAGTGTACCAGCTTCTTCAGGTCTGATGCATCCTTCAAGCTTGGGTAATCCATCCCTTGCTTGGCTGCCACCCCAGTCATCAACATATGGATCTATACTGCCCCCACAAGTACAAGCTCATGCATCAGCAATGGGATCAGGGGCATACATGGGGCAACAAATGCCGACTAACATGCCCATGCCAAGGCATCAAGAAATTGGGAATTTTAGTACTGAGGGAGCTTCTTTCGGCTTCTCAAATCCAGATCAGCAGTTGACGGGTAGGTTCCCGGCAACTGCTGCCCCAAATCCCTTTCCAGCGGGAGGGAATCCATTTGGGTGA 2090 0.4617 MANRLKEDEKNERIIRGLLKLPENRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNKRAKEIYFKEWDAQRQSFPDSSNVDRLRAFIKHVYVDRRFSGERAYDKPPRVDTYQGGSKSPPYEETYERRQSDRSSPGGRSYDERRSPGYDQESRQYGDYKRSPGRPPIVTDWRREDRFGDRRISDGDYKPEGQSPDRAKDLDSSSPPVVQPVRDILGENVVPLRISEPPKGGSGKAADGSVLTQRTASSSSLASSNGNPVEVKLESSKSLIDFDAELEPTAAPAIPQAQQTTVAQPLVQPANSSGETNWASFDVAPEAKANQGPSNVNPLESVLSQLSVSESVPAGYVASGLTSSAAGSASVSGLSTFPPSGASVTAPGLTTLSPLNGPGQWHRMQHQQPLFPATVSQSATQQLAPLVGGALSNQLWNVPHAPATQGHLSMPTQHTSHLVSKPANEATSEGKPSGRKELPEDLFTLKYSSFPSPASGWQMGPSYGMGIPMQYNTVVSMPSFPQSSKSTNPFDVSSMPHPVQAPTFPSMSSLQGALPSVPASSGLMHPSSLGNPSLAWLPPQSSTYGSILPPQVQAHASAMGSGAYMGQQMPTNMPMPRHQEIGNFSTEGASFGFSNPDQQLTGRFPATAAPNPFPAGGNPFG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01542 676 PANTHER ARFGAP/RECO-RELATED 1 676 IPR044820 GO:0005096
Bach1g01542 676 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Bach1g01542 676 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Bach1g01542 676 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Bach1g01542 676 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Bach1g01542 676 MobiDBLite consensus disorder prediction 457 492 - -
Bach1g01542 676 MobiDBLite consensus disorder prediction 263 285 - -
Bach1g01542 676 MobiDBLite consensus disorder prediction 127 285 - -
Bach1g01542 676 MobiDBLite consensus disorder prediction 461 482 - -
Bach1g01542 676 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Bach1g01542 676 MobiDBLite consensus disorder prediction 656 676 - -
Bach1g01542 676 MobiDBLite consensus disorder prediction 146 183 - -
Bach1g01542 676 CDD ArfGap_AGFG 12 122 - -
Bach1g01542 676 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Bach1g01542 676 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Bach1g01542 676 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Bach1g01542 676 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Bach1g01542 676 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01542 Bach-Chr1 29077834 29083560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01542 12 146 C2H2 Transcription Factor Family AT4G05330 33.333 3.90e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01542 - - gmx:102669541 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01542 1 29077834 29083560 Bach1g01542 1 29077834 29083560 ECH