LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g01522	ATGGTTCGTCAACATCCACAAATACTGTTTTCAGATATTGAGAAAACCCTAAAGCCAAAGATTGAGTTCTTTCAACGAATTGGTTTTGATGATTCTGAGCTGGCTAAGTTTCTTTCCAAGAATACAACTGTGTTGACTTTTAGTTTAGATAAAACATTGGTCCCCTCTGTGGAAGCAATTAGGAAAATTTTGTACAATGATAAATATTTTATTCGGGTTTTGCATAGGTTTGGCAGCCGAATACTCTCAAAGCACCTGAGATTTATAGGGAATGTTGCCTTCTTCGAGAATGTTGGGATCGTTGGGTCACAGCTTTTACTATTACTGAAACGGCAGCCGTGGCTTTTCACTGCAAAGGAGTGCTTGCTTAAAAACTTTATTTCTCGGGCTGTAGACATGGGTTTCCACATAAATTCAAAAATGTTAGTCCATGCACTTTTTACAATCTGTGGCTTGAAGATTGAAACACTAAGGAGAAAGCTGGAATTTATTCAGAGTTTTGGCTTTTCTAAAGATGAGAGCATGGAAATGTTTAGAAGAGCTCCAAATTGGCCTAGAGTATCTGAGAAGAAACTACGTCTTGGAATTGAGTTCTACTTGCACACAGCTATGTTGCCCAAGTCTGTCTTGGTTCATAAACCTACAATTTTGATGTTAAGCATAGAGGACAGGGTGATTCCTCGATACAGGGTTTTGCAGCTCTTACAATCAAAGAATTTATTTAGAAGGGCACCAACTCTTACTACGGTGTTGTGTTTGGGAGAGGAGGTATTTCTGAAGAAGTATATTTCCCCCTTTAGAGACATCGCAGGGGAATTATTGGTAGCTTACAAGGGTCACTATCAGGAGGCTGCTTAA	858	0.3916	MVRQHPQILFSDIEKTLKPKIEFFQRIGFDDSELAKFLSKNTTVLTFSLDKTLVPSVEAIRKILYNDKYFIRVLHRFGSRILSKHLRFIGNVAFFENVGIVGSQLLLLLKRQPWLFTAKECLLKNFISRAVDMGFHINSKMLVHALFTICGLKIETLRRKLEFIQSFGFSKDESMEMFRRAPNWPRVSEKKLRLGIEFYLHTAMLPKSVLVHKPTILMLSIEDRVIPRYRVLQLLQSKNLFRRAPTLTTVLCLGEEVFLKKYISPFRDIAGELLVAYKGHYQEAA	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g01522	285	PANTHER	CGI-12 PROTEIN-RELATED	1	266	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	SMART	mt_12	140	170	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	SMART	mt_12	175	206	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	SMART	mt_12	207	238	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	SMART	mt_12	1	30	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	SMART	mt_12	35	66	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	Gene3D	Transcription termination factor 3, mitochondrial	78	267	IPR038538	-
	Bach1g01522	285	FunFam	Mitochondrial transcription termination factor-like	49	270	-	-
	Bach1g01522	285	Pfam	mTERF	2	114	IPR003690	GO:0003690\|GO:0006355
	Bach1g01522	285	Pfam	mTERF	151	258	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g01522	Bach-Chr1	28810985	28811842	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Bach1g01522		mTERF	5.7e-13	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g01522	K15031		-	vvi:100268158	290.426