Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01517 ATGGTGGAAAATTTACCTCCTGGCTTCAGATTCCATCCTACAGATGAAGAGCTCATCACCTTTTATCTGACAAGGAAAGTTTCTGATAATAGTTTCACATCCAAGGCTATAGCAGTTGTTGATCTCAACAAGTCTGAACCTTGGGACCTCCCAGGCAAGGCAGCCATGGGAGAGAAGGAGTGGTATTTCTTCAGTTTAAGAGATCGGAAGTACCCAACTGGGCTTCGAACAAACCGTGCAACAGAATCAGGGTACTGGAAAACCACAGGGAAAGACAAGGAAATTTTCCGAGCTGGTGTTTTGGTGGGAATGAAGAAAACCCTAGTCTTCTATAAGGGAAGAGCTCCAAGGGGTGAGAAAAGCAATTGGGTCATGCATGAATACAGGCTGGAAAACAAGAATCCCTTTAGACCTTCAAAGGAAGAGTGGGTGGTTTGCAGGGTATTCCAGAAGAGTGCAGCAGCGAAAAAGCCACAGCCAACATCATCCTCTCAGCCTTCAATGGGTTCCCCTCGTGATACAAATTCAATGGTCAACGAATTTGGAGATATCGAGCTGCCAAACTTAAATAATTCCATTGCAAATTCTTCAAGTGGATTAATCACTAACATTTCAGCACAAACTTACACAAGCGATTACGATAACAATATTGTTAACACAAATATGAACTTAAACATGAATTGGCCATCGTCAGGTGCAAGTGAGGTTCCCCCACCCTTTCCGTGGCCTTCAGCTGGCTTGTTGAGTCCAAATCTTTCATTGAATTCCTTACTTCTCAAGGCATTACAGCTTAGGAGCAGTTATCAACAAAGAGAAGCAGCTGCAGCTACGGAACATTTTCCCCCATACATGCCACAAGGATCAATTTCTTCCCTCCTAGGGACTGACCTGAGTTCAAGTACTCTTACTGCTTCTTCCTCAAAAATTTTAGAATGTATGCCACAGCAACAGCAGCAGCAGGAGCAACCGTTCAATTTGGACTCCATTTGGTGA 993 0.4381 MVENLPPGFRFHPTDEELITFYLTRKVSDNSFTSKAIAVVDLNKSEPWDLPGKAAMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFRPSKEEWVVCRVFQKSAAAKKPQPTSSSQPSMGSPRDTNSMVNEFGDIELPNLNNSIANSSSGLITNISAQTYTSDYDNNIVNTNMNLNMNWPSSGASEVPPPFPWPSAGLLSPNLSLNSLLLKALQLRSSYQQREAAAATEHFPPYMPQGSISSLLGTDLSSSTLTASSSKILECMPQQQQQQEQPFNLDSIW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01517 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 223 - -
Bach1g01517 330 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Bach1g01517 330 MobiDBLite consensus disorder prediction 154 176 - -
Bach1g01517 330 FunFam NAC domain-containing protein 100-like 14 155 - -
Bach1g01517 330 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Bach1g01517 330 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Bach1g01517 330 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Bach1g01517 330 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01517 Bach-Chr1 28780971 28782647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01517 1 330 NAC Transcription Factor Family AT3G18400 61.424 6.32e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach1g01517 NAM 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01517 - - gmx:100780030 447.203