Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01510 ATGTCTTCGTCTTCTTCAAAGAGCATTAGTAGCTCTAGTGAAGATGATAATGAGCTTAGGAGAGGACCTTGGACCCTTGAAGAGGATACTCTGCTCACTCAATACATTGCTCAACACGGTGAAGGGCGTTGGAATTTGCTTGCAAAACGTTCAGGGCTGAGAAGAACAGGAAAGAGTTGCAGACTAAGATGGTTAAACTATCTAAAGCCAGATGTTAAGCGTGGGAATTTAACTCCTCAAGAGCAGCTTTTGATTCTTGAACTCCACTCCAGGTGGGGTAACAGATGGTCAAAGATAGCACAGCATTTGCCGGGGAGGACAGACAATGAGATCAAGAATTACTGGAGAACCCAGGTGCAGAAAAAAGCAAGACATCTTAAAATTGACACAGATAGCAGGGAGTTCCAACAACTGCTTGGGGGGTTCTGGATACCAAGATTGTTGCAGAAAGCAATGGATTCATCTTCTTCGGCCGTGTCACTCCAAAGCCAACCAATTCCTCCGCTTCTCGACCCTGTTTCTGATCAGTATTCAGCAGTAAGGACAAGTACAACCCCACCACAGATTCCAATCGTCAGTTTTATGGATCATCATCAGCATAACTCAGACTTGGACCAGAACATGTGTTCCTCAGAATCATCGAACACTCCGATTCTGCCTCAATTCTTGGGATCCACTGCCACTCCTTTTCATGCGCCAGCCAACACTGACACGAGCACATTTGTGTATGATGGCTGCTACTCTGTCAATAACAATGTCTACGACATGGAACCCTCCAACCTGGAAGCTACAATAGCAGCAGCTCAGGAGATGGAATACCATGTTGGTGATTGCCAAGTGGCACAGAACAATTGGGTGAACAATGATTTTTCATGTAGCATGTCGAACACAGATGAATTGTGGTGGTTTAGGAACTTACATACATAACAGTTTCGGATTCATTTTTGGAATAACCCACATAGAAATGTTTGTTAGTATTTGTTGTTCATTCTCTAGCAATATTATATACAGGGC 1014 0.4379 MSSSSSKSISSSSEDDNELRRGPWTLEEDTLLTQYIAQHGEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTQVQKKARHLKIDTDSREFQQLLGGFWIPRLLQKAMDSSSSAVSLQSQPIPPLLDPVSDQYSAVRTSTTPPQIPIVSFMDHHQHNSDLDQNMCSSESSNTPILPQFLGSTATPFHAPANTDTSTFVYDGCYSVNNNVYDMEPSNLEATIAAAQEMEYHVGDCQVAQNNWVNNDFSCSMSNTDELWWFRNLHT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01510 308 SMART sant 20 70 IPR001005 -
Bach1g01510 308 SMART sant 73 121 IPR001005 -
Bach1g01510 308 MobiDBLite consensus disorder prediction 1 20 - -
Bach1g01510 308 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Bach1g01510 308 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Bach1g01510 308 CDD SANT 78 117 IPR001005 -
Bach1g01510 308 FunFam MYB transcription factor 77 119 - -
Bach1g01510 308 CDD SANT 23 68 IPR001005 -
Bach1g01510 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Bach1g01510 308 Gene3D - 21 73 - -
Bach1g01510 308 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Bach1g01510 308 Gene3D - 77 122 - -
Bach1g01510 308 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Bach1g01510 308 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Bach1g01510 308 FunFam Myb transcription factor 21 73 - -
Bach1g01510 308 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 196 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach1g01510 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01510 Bach-Chr1 28721670 28722926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01510 1 304 MYB Transcription Factor Family AT1G68320 45.779 6.25e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01510 Myb_DNA-binding 4.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01510 K09422 - gmx:778042 392.889