Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01486 GTTTGGTCCATCTCTTCTCCCTCTCTTTCTAAATCATGCCTGTGGTTGCAGACGCCTCAACAGTAGCTGAACACATCAAATGGAGAAGACCCAGAAACCAATTTAGCCACGCCATTGCAGAAGCGGATCCTAATCCACAAATCCCTTCCATAATCCAATCTACTCGCTGCAAATCCACAATTTCCTCTCTGCTCCTCTCTACCTTCTCTAACAACAGCACAAATGAAACCATACCAGGCAATAGCAATGGCGGTGGCCATAATAACAAAAAGAAGAACAATTTCTCTGCAGCAAGTTTTAGAGGACTCGGATGCACTGCTAGCGCGTCGCAGCAAGTGTCGGTTCCGGCGGTGATTCGGACATCGGCGGATTGGCAGGGAAAGAAGGCAAGAAAAAAGAAGCACAAAAGGAGTAATGCGAAGAACAATAACGGCAGCAAGACCGTTCAAGGCGTTCTTGATGGTTCAAACTCTGGGTCTGCTAATTTTGTCGATTTTCAAGATGTTTGGTGTGGCCCTGGAATTGGGTTTTCAGCCGATGCTGCTGCCTCGGTCGATTGCGTCGTGGCCAGGAGGAATGTGTCTGCAAGAGGGAAGATTGACGTGGAGAAGATAAGCCACAGGGAGAGGGAGCGTCCATCTTACTTAGGGAGGCGCACTGTAAGCCCAGAACCCATCTCGTTTATAGATTCTGATCCTGACATTTTCGAAACGCGCCCTGCCTCTGACTCATTCGAAACTGCTAGATTCTTTCGCCATGTTCGACCTCCATCCTCTGATGGTTTTCCCGAGATTGTGATGCTTCAAGGAAGTGTGCTAATGGGGGGAAGATTAGATTCCTACGATCGATTTAGAGACTGGAGGCTTGATGTTGACAACATGACGTATGAGCAACTGCTTGAGCTTGGTGAGAGAATTGGTCATGTGAACACTGGACTTAAAGAAGATGAAATAGGTTCCAATATTAGAAAAAGTAAGCCTGCAATCCTCACTGATACATCAACACCTCAAGCAAATCAATTTGACAAAAAATGCAGCATTTGTCAGGAAGAGTATGAAGGAGATGATGAGCTGGGGAAACTAAATTGTGGACATAGCTATCATGTACAATGTATAAGACAATGGCTTGCGCAGAAGAACTTCTGCCCGGTCTGCAAGGCAGAAGTTGTGGTTCGTCAACGAGTGGCACAATCCTGA 1196 0.4649 MPVVADASTVAEHIKWRRPRNQFSHAIAEADPNPQIPSIIQSTRCKSTISSLLLSTFSNNSTNETIPGNSNGGGHNNKKKNNFSAASFRGLGCTASASQQVSVPAVIRTSADWQGKKARKKKHKRSNAKNNNGSKTVQGVLDGSNSGSANFVDFQDVWCGPGIGFSADAAASVDCVVARRNVSARGKIDVEKISHRERERPSYLGRRTVSPEPISFIDSDPDIFETRPASDSFETARFFRHVRPPSSDGFPEIVMLQGSVLMGGRLDSYDRFRDWRLDVDNMTYEQLLELGERIGHVNTGLKEDEIGSNIRKSKPAILTDTSTPQANQFDKKCSICQEEYEGDDELGKLNCGHSYHVQCIRQWLAQKNFCPVCKAEVVVRQRVAQS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01486 386 ProSiteProfiles Zinc finger RING-type profile. 333 374 IPR001841 -
Bach1g01486 386 SUPERFAMILY RING/U-box 332 380 - -
Bach1g01486 386 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 60 377 IPR045191 GO:0061630
Bach1g01486 386 SMART ring_2 333 373 IPR001841 -
Bach1g01486 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 383 IPR013083 -
Bach1g01486 386 MobiDBLite consensus disorder prediction 111 141 - -
Bach1g01486 386 Pfam Ring finger domain 332 374 IPR001841 -
Bach1g01486 386 MobiDBLite consensus disorder prediction 115 129 - -
Bach1g01486 386 MobiDBLite consensus disorder prediction 60 81 - -
Bach1g01486 386 FunFam E3 ubiquitin-protein ligase rnf12-A 297 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01486 Bach-Chr1 28331665 28335319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01486 1 285 C3H Transcription Factor Family AT1G73760 41.447 4.10e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01486 - - qsa:O6P43_005125 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01486 1 28331665 28335319 Bach1g01486 1 28331665 28335319 ECH