Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01463 ATGGGTATCAAAGATCTTCTCAGATTTATGAAGCCGTATATCGAACCCGTTCATATCAAGATATATGCTGGCAAGCGGGTGGGTATTGACGCATATTCATGGCTTCATAAGGGAGCTTATTCATGTAGTATGGAGCTTTCTCTCGATTCTGATAGTGAAAAGAAATTGCGGTACATACACTACTTTATGCATCGAATCAATCTGCTTCGCCACTATAACATAACTCCAGTTGTCGTTTTTGACGGTGGTAATCTTCCTTGCAAGGCAGCTACGGAGGAAGAAAGGCACAGGCACGGTTTTAGAATTTTTAGTCTTTTTTCCCAAAAGAGAAGTACTAATCGTGAATTGGCTATGGCCAAGCTTAAGGAAGGGAATGTCAGTGCAGCCACAGAGCTGTTCCAGAGAGCAATAAGTATTACTCCCCTTATAGCACATCAACTGATTCAGGTTCTCAGGTTAGAAAACATTGAATTTTTTGTAGCTCCATATGAGGCAGATGCTCAGCTTGCGTATATGTCCAACCTTGAAGCAGAAAAGAGTGGAATTGTAGCAGTGATCACAGAGGATAGTGATCTAATGGCATATGGTTGTCCAGATATTGTCTTTAAGATGGACCGTTATGGGAATGGTGAAAGAATAGAGTTAGAGAAGGCTTTCAATGTTGAGACTTGTAAACCTTCATTTCGAAGATTTGATATGGAACTCTTCACAGGTATGTGCGTCTTAGCTGGCTGTGATTTTCTTCCATCTGTTCCTGGAATTGGGATCGCACGAGCGCATGGCTTAGTTTCCAAGTATCGAAGCTTAGATCGTGTGTTATCTGTTCTAAAATACGAAAAGGGCGACCAAGTGCCTGAAGATTACTCAAAATCCTTCAAAGAGGCAGTTGCAGTCTTCCATCATGCTCAAATATATGATGTTAATGCTAAGGCACTCAAACATATGAAGCCTATTCCGCCGGAGCTTCTTCAGTCTCTTGACGGAAAGCTTGATTTCTTGGGACCAGAAATACCCCCGTCTTTAGTCAGTGCAATAGCTGAAGGAAACATAAATCCATCAACTAAGAAAGCCTTTGATAAGGTTCAAGGCTCTGCACTTTATTTAGACTCCACTGCCTTCCAAAGCACCAGTCAACTCAAGAAAGCTACAGTTCTCCCACCATTGACGCAGGAGAGCTGCTTTATGGTCTTCGGTTCCTATAATACCAGAGAAAACAGTACAGGCAAGTTGCTTACGTCCTTATTAATCTTGGATAAAGAAGAGTGTTCCAATGAAGCATTGGCACTTCAGAAACTGATCGTGCCAATGGAAACTTGTGGAGCAGTTCCAAACACCAGAGTCCCTGATGACACTCCATTAAAGGTACCTGATAACAATCCATTCAGGATAAGAAAACCCAAGATTTCTTTGGTTCAGAGAGAGAACTCTGATGAAAAAGATCCCGTTTTAAGGCCTGTGGAAAATCTTGACATGTGCCCGTCTCCAGATAACTCCAAACGAGCGGAATCTGATAGTCTCTCAAGGAAAAGGAAACTTCAGAACATCTGCTCAGATCAATTAGAGGCCACTGATGACCAAGTTTCAGGAGTAACCGAAGTGGAAGACTTCGATATATTATGCACGACGATGGAATCCCAAGAAAGTGTAAATTCTAAGACCAGAAAAGATGCCATTTTGAAAGGAAGAAGTGAAAGTGAAAAGAAATCCAAGAGAAGCAATTCAAAGAAAACAAAGAGTACTAATAGCATATTAAATTTCTTTTCTCGAGTGTAA 1773 0.4123 MGIKDLLRFMKPYIEPVHIKIYAGKRVGIDAYSWLHKGAYSCSMELSLDSDSEKKLRYIHYFMHRINLLRHYNITPVVVFDGGNLPCKAATEEERHRHGFRIFSLFSQKRSTNRELAMAKLKEGNVSAATELFQRAISITPLIAHQLIQVLRLENIEFFVAPYEADAQLAYMSNLEAEKSGIVAVITEDSDLMAYGCPDIVFKMDRYGNGERIELEKAFNVETCKPSFRRFDMELFTGMCVLAGCDFLPSVPGIGIARAHGLVSKYRSLDRVLSVLKYEKGDQVPEDYSKSFKEAVAVFHHAQIYDVNAKALKHMKPIPPELLQSLDGKLDFLGPEIPPSLVSAIAEGNINPSTKKAFDKVQGSALYLDSTAFQSTSQLKKATVLPPLTQESCFMVFGSYNTRENSTGKLLTSLLILDKEECSNEALALQKLIVPMETCGAVPNTRVPDDTPLKVPDNNPFRIRKPKISLVQRENSDEKDPVLRPVENLDMCPSPDNSKRAESDSLSRKRKLQNICSDQLEATDDQVSGVTEVEDFDILCTTMESQESVNSKTRKDAILKGRSESEKKSKRSNSKKTKSTNSILNFFSRV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01463 590 SMART xpgn3 1 102 IPR006085 GO:0004518
Bach1g01463 590 MobiDBLite consensus disorder prediction 549 571 - -
Bach1g01463 590 Pfam XPG N-terminal domain 1 96 IPR006085 GO:0004518
Bach1g01463 590 FunFam Exonuclease 1, putative 1 225 - -
Bach1g01463 590 MobiDBLite consensus disorder prediction 576 590 - -
Bach1g01463 590 Gene3D - 229 302 - -
Bach1g01463 590 SMART HhH_4 233 266 IPR008918 GO:0003677|GO:0003824
Bach1g01463 590 CDD PIN_EXO1 1 220 IPR044752 GO:0046872
Bach1g01463 590 MobiDBLite consensus disorder prediction 469 508 - -
Bach1g01463 590 SMART xpgineu 152 224 IPR006086 GO:0004518
Bach1g01463 590 MobiDBLite consensus disorder prediction 469 485 - -
Bach1g01463 590 SUPERFAMILY PIN domain-like 2 246 IPR029060 -
Bach1g01463 590 Pfam XPG I-region 155 246 IPR006086 GO:0004518
Bach1g01463 590 Gene3D - 1 224 - -
Bach1g01463 590 MobiDBLite consensus disorder prediction 545 590 - -
Bach1g01463 590 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 231 361 IPR036279 -
Bach1g01463 590 FunFam exonuclease 1 229 302 - -
Bach1g01463 590 CDD H3TH_FEN1-like 234 306 - -
Bach1g01463 590 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 236 251 IPR006084 -
Bach1g01463 590 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 151 168 IPR006084 -
Bach1g01463 590 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Bach1g01463 590 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 76 95 IPR006084 -
Bach1g01463 590 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 575 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01463 Bach-Chr1 28148626 28152687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01463 1 304 Core DNA Replication Machinery Family AT5G26680 24.051 3.95e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01463 K10746 - gmx:100817932 732.635