Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01461 CAAGTTCTAGCTAGGTTTCGATGAGAAAGCCTTGCTGTAAGGAAGAAACTAATAAAGGATCTTGGTCCAAGGAAGAGGACCGGAAACTCATGGACTACATAAAGAAACATGGTGAAGGCCGCTGGCGTTCAATCCCTCATGCTGCAGGGTTACGTCGTTGTGGCAAAAGTTGCCGGTTGAGGTGGCTGAACTATCTCAAGCCTGGAGTTAAACATGGAGACTTCGGAGAAGATGAAGAGGACCTAATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGGCCCTGATAGCTGGAAGATTGCCTGGAAGGACAGATAATGAAGTCAAGAATTACTGGAATTCCCATATCAGGAAAAAGCTAATACACATGGGGCGTTATCCCAATAATCTTCATGCCTTTAGAAGTTCTGTCCTTGCTACTAGTAAGTCAGTGGGAAATGATGAGGTTCATGAGTGCAATATCAACAATTTTCCTGAATTGAATCTTGATCTTACGCTCAGCACTTCCTCCATGGAAAGAGAAGCCCTTCAAGATTGA 539 0.4471 MRKPCCKEETNKGSWSKEEDRKLMDYIKKHGEGRWRSIPHAAGLRRCGKSCRLRWLNYLKPGVKHGDFGEDEEDLIIRLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRKKLIHMGRYPNNLHAFRSSVLATSKSVGNDEVHECNINNFPELNLDLTLSTSSMEREALQD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01461 172 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Bach1g01461 172 SUPERFAMILY Homeodomain-like 11 106 IPR009057 -
Bach1g01461 172 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Bach1g01461 172 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Bach1g01461 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Bach1g01461 172 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Bach1g01461 172 Gene3D - 12 64 - -
Bach1g01461 172 CDD SANT 70 110 IPR001005 -
Bach1g01461 172 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 134 - -
Bach1g01461 172 CDD SANT 14 59 IPR001005 -
Bach1g01461 172 FunFam MYB-related transcription factor 11 64 - -
Bach1g01461 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 114 IPR017930 -
Bach1g01461 172 Gene3D - 67 130 - -
Bach1g01461 172 FunFam MYB transcription factor 66 126 - -
Bach1g01461 172 SMART sant 64 112 IPR001005 -
Bach1g01461 172 SMART sant 11 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01461 Bach-Chr1 28126042 28127001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01461 2 149 MYB Transcription Factor Family AT4G38620 61.333 8.16e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01461 Myb_DNA-binding 5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01461 K09422 - jre:108985243 236.498