LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g01438	ATGGTGTCACTAAATCTGCAAAAGAGACTTGCTGCAAGCATACTCAAATGTGGCCAAAGAAGAGTGTGGCTTGACCCTTATGGGATCAATGAAATCTCTATAGCCAATTCTAGGATGAACATACGAACTCTGGTAAAAGATGGGCATATAATAAAGAAACCATTGAAAATCCACTCAAAATGGCATCTTCGACATGATCGCGCAGCAAAGTTTAAAGGCAGGCATTCAGGCCATGGAAAGCGAAAGGGAACAAGAGAAGCAAGGATGCCATCAAAGGTGTTATGGATGAGAAGGATCAGAGTATTGAGACGTCTACTGCATAGGTATCGAGAGGTTGGAAAAATTGATAAGCACCTTTACCATGAAATGTACATGAGGGTCAAAGGAAATGATTTCAAGAATAAACGCATGTGCGTGGAAATCATTCACAAGATTAGGGCTGAAAGATTGAGAGACAAAGAGCTTCAAGATCAAATGGAAGCCAAGAGAAGAAGAACAAGTCTAAAAGAAGGGAAACAGATTTCATGGATGGGAAATATGTCAAGACAAATATGA	555	0.4	MVSLNLQKRLAASILKCGQRRVWLDPYGINEISIANSRMNIRTLVKDGHIIKKPLKIHSKWHLRHDRAAKFKGRHSGHGKRKGTREARMPSKVLWMRRIRVLRRLLHRYREVGKIDKHLYHEMYMRVKGNDFKNKRMCVEIIHKIRAERLRDKELQDQMEAKRRRTSLKEGKQISWMGNMSRQI	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g01438	184	PANTHER	60S RIBOSOMAL PROTEIN L19	1	169	IPR039547	GO:0003723\|GO:0003735\|GO:0022625
	Bach1g01438	184	SMART	Ribosomal_L19e_2	3	146	IPR000196	GO:0003735\|GO:0005840\|GO:0006412
	Bach1g01438	184	FunFam	Ribosomal protein L19	57	182	-	-
	Bach1g01438	184	SUPERFAMILY	Ribosomal protein L19 (L19e)	3	144	IPR035970	GO:0003735\|GO:0005840\|GO:0006412
	Bach1g01438	184	ProSitePatterns	Ribosomal protein L19e signature.	7	26	IPR023638	-
	Bach1g01438	184	FunFam	Ribosomal protein L19	1	56	-	-
	Bach1g01438	184	Gene3D	-	57	181	-	-
	Bach1g01438	184	Gene3D	-	1	55	IPR015972	GO:0003735\|GO:0005840\|GO:0006412
	Bach1g01438	184	Pfam	Ribosomal protein L19e	4	144	IPR000196	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g01438	Bach-Chr1	27881571	27882747	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g01438	1	163	Cytoplasmic Ribosomal Protein Gene Family	AT3G16780	66.871	8.54e-77	227

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g01438	K02885		-	qsa:O6P43_005194	234.187