Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01423 ATGAGCGAGCAAGTTCGAAGGGATAGGTCCAGGGTTCCTGGCCAAAATACTCGTCAGGAATGGGTTCCTAGAGCATCCACCATCACTGCCCCACCATCAAATATGCAGTTAGATCGGAATGATGACAGTGGTTGCTCAAATAATAGTGTTGCTTCTTCAGCAAGTTGGCATAGAAGCAATCATGTTTCAAGGGGTTACACAAATCGTCCTGTAAATCAGAGAAGGGAAAGGGAAAAAGGAAGGAGTGAGAATCAGGCAGGGAAGGAATTGAGAGACCCTAGTTTGCCTCAATTGGTGCAAGAGATTCAGGAAAAGTTAATGAAAAGCAGTGTTGAATGCATGATTTGCTATGACATGGTCCGGAGGTCTGCGCCTATCTGGTCTTGTTTGAGCTGCTACTCTATTTTTCATCTGAATTGTATAAAAAAATGGGCTCGGGCGCCCACATCAGTTGATTTGTCTGCAGAGAAGAATCAAGGATTTAACTGGCGGTGTCCTGGTTGTCAATCTGTACAGCTCACATCATCTAAGGATATTAGGTATGTTTGCTTTTGCGGAAAGAGGACAGACCCTCCATCGGATTTGTATCTGACACCACATTCATGTGGAGAACCGTGTGGAAAGCCTCTTCAGAAGGAGGTGTTGGTTGCTGGAGTGAGTAAGGAGGATCTTTGCCCTCATGTTTGTGTCTTGCAATGCCATCCAGGTCCATGCCCTCCCTGTAAAGCATTTGCTCCTCCCTGTTTGTGTCCTTGTGGGAAGAAAACAATTACCACGCGTTGCTCTGATCGGCAGTCTGTTCTTACCTGCGGCCAGCTCTGTGATAAGCTTCTTGAATGTGGACGTCATCGTTGTGAGCGCATTTGTCATGTGGGTCCTTGTGATCCTTGTCAGGTCCTTATGAATGCCTCTTGCTTTTGCAGTAAAAAGATGGAGGTTATTCTTTGTGGGGACATGGCTTTGAAGGGTGAAATTAAAGCTGATTCTGGTGTTTTCTCTTGTGGTTCCAATTGTGGGAAAAAACTTGGTTGTGGTAATCATACTTGTAATGACATTTGTCATCCAGGCAGCTGTGGAGAGTGTGATTTATTGCCTAGCATAGTTAAGACATGTTGTTGTGGGAAAACAAGATTGGAGGAGGAACGGCAGAGTTGTTTGGATCCAATACCAACCTGTTCAGAAGATTGTGACAAGCCTCTTATCTGCAGGATCCATCGTTGTAGAGAGCCATGTCATGCTGGAGATTGTCCGCCCTGTTTGATTCTTGTATCCCAAAAGTGTCGATGTTTTTCAACTTCCAGAACTGTGGAGTGCCACAAGACTGTGATGGAGAATGAGAAATATACTTGCGAAAAGCCATGTGGGCGGAAAAAGAACTGTGGAAGGCATCGATGTAGTGAAAGGTGCTGTCCACTTTCTAATCCTAATAATCATCTGAGTGGGGATTGGGATCCTCACTTTTGTTCCATGCCATGTGGAAAGAAGCTAAGGTGCGGGCAGCATGCTTGTGAGTCCCTCTGTCATAGTGGCCATTGTCCACCTTGTCTTGAAACTATCTTCACTGATCTAACATGTGCTTGTGGGAGGACGTCTATTCCTCCGCCGCTGCCTTGTGGCACACCTCCCCCTTCATGTCAGCTTCCATGCTCGGTCCCTCAGCCTTGTGGCCATTCAGCCTCCCACAGCTGCCATTTTGGAGACTGCCCACCATGTTCAGTGCCTGTAGCAAAAGAATGTATTGGTGGGCATGTGGTTCTTAGGAACATACCTTGTGGGTCAAAAGATATCAGATGCAATAAGCTATGCGGGAAGACCAGGCAGTGTGGTTTACATGCTTGTGGCAGAACTTGTCACCCCCAACCTTGTGACAATCCATCTGGAGGTGAGCAAGGGCTGCGTTCTTCTTGCGGGCAAACATGTGGTGCTCCAAGAAGAGACTGTAGGCATACATGTCCATCCCCATGTCACCCTTTATTTCCATGCCCTGATTTAAGATGTGAGTTCCCAGTCACAATCACTTGTTCTTGTGGCCGTATAACAGCGAGTGTTCCATGTGATGCTGGTGGTAGTAGTGGTAATTATAATTCTGATGCCATACATGAGGCTTCCATAATTCAAAAGTTGCCTGTGCCACTTCAACCAGTGGATTCTACTGTCAACAAAGTCCCGCTTGGACAAAGAAAGCTGATGTGTGATGATGAATGTGCTAAGTCGGAGCGTAAAAGGCTTCTTGCTGATGCTTTTGACATTACCACTCCAAATTTAGATTCCCTCCACTTTGGTGAGAATTCTGTTGCCTCTGAATTGCTTTCTGACTTGTTCAGGCGTGATCCTAAATGGGTTTTATCTGTGGAGGAGAGATGCAAATTTTTAGTACTTGGCAAGAGCAGAGGAACTACACATGGTTTGAAAGTCCATGTTTTCTGCCCTATGCTCAAGGATAAGAGAGATGCAGTGAGGGTGATCGCTGAGAGATGGAAGCTTGTAGTGAGTGCAGCTGGTTGGGAGCCTAAGCGTTTTATTGTAGTTCACGTGACACCAAAGTCAAAGGCTCCAGCTCGTGTGCTAGGGGTTAAGGGCACGACAACTGTAAATGTGCCCCTTCCTCCTGCATTTGATCCCTTGGTAGACATGGACCCCCGGCTAGTTGTCTCTTTCCCTGATTTACCTAGAGACGCTGATATAAGTGCATTGGTGTTAAGATTTGGTGGTGAATGTGAACTTGTATGGTTGAATGACAAAAATGCATTGGCTGTTTTTAATGATCCTGCTAGAGCAGCAACTGCAATGAGGAGGTTGGATCATGGAACAGTTTATCATGGAGCTGTTGTAGTTGCCCAAAGTATTGGGGCATCAGCAGCGTCTTCTGCCACCAATGCGTGGGGAGGAATTGGGACAATGAAGGAAGGAGGAGCACTGACAGCATTGAAGGGTAATCCATGGAAAAAAGCGGTGGTTCAAGAAGCAGGTTGGAGAGAAGATTCTTGGGGTGATGAAGAGTGGACAGGTGGTTCTGCTAATATCCAGCCATCTGTGTGGAAGAAAGAAGAAGCCCCAATTACTGCTTCATTAAATCCTTGGAGTGTCTTGGACCAAGAATCATCTTCAAGTTCATCTGTTGCAACTCTCAGAACCGAAGTACCTAGGAAGCAGCCTGCAAGTACAGCCATTTCAAGGCTAGAGTCTAACTCAGGAGGGCAGAGTGGAGGGAAGTTGGATGAAACAGAAGTCTCTGAAGTGGTAGATGACTGGGAGAAAGCATATGAATGA 3270 0.4621 MSEQVRRDRSRVPGQNTRQEWVPRASTITAPPSNMQLDRNDDSGCSNNSVASSASWHRSNHVSRGYTNRPVNQRREREKGRSENQAGKELRDPSLPQLVQEIQEKLMKSSVECMICYDMVRRSAPIWSCLSCYSIFHLNCIKKWARAPTSVDLSAEKNQGFNWRCPGCQSVQLTSSKDIRYVCFCGKRTDPPSDLYLTPHSCGEPCGKPLQKEVLVAGVSKEDLCPHVCVLQCHPGPCPPCKAFAPPCLCPCGKKTITTRCSDRQSVLTCGQLCDKLLECGRHRCERICHVGPCDPCQVLMNASCFCSKKMEVILCGDMALKGEIKADSGVFSCGSNCGKKLGCGNHTCNDICHPGSCGECDLLPSIVKTCCCGKTRLEEERQSCLDPIPTCSEDCDKPLICRIHRCREPCHAGDCPPCLILVSQKCRCFSTSRTVECHKTVMENEKYTCEKPCGRKKNCGRHRCSERCCPLSNPNNHLSGDWDPHFCSMPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPQPCDNPSGGEQGLRSSCGQTCGAPRRDCRHTCPSPCHPLFPCPDLRCEFPVTITCSCGRITASVPCDAGGSSGNYNSDAIHEASIIQKLPVPLQPVDSTVNKVPLGQRKLMCDDECAKSERKRLLADAFDITTPNLDSLHFGENSVASELLSDLFRRDPKWVLSVEERCKFLVLGKSRGTTHGLKVHVFCPMLKDKRDAVRVIAERWKLVVSAAGWEPKRFIVVHVTPKSKAPARVLGVKGTTTVNVPLPPAFDPLVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDKNALAVFNDPARAATAMRRLDHGTVYHGAVVVAQSIGASAASSATNAWGGIGTMKEGGALTALKGNPWKKAVVQEAGWREDSWGDEEWTGGSANIQPSVWKKEEAPITASLNPWSVLDQESSSSSSVATLRTEVPRKQPASTAISRLESNSGGQSGGKLDETEVSEVVDDWEKAYE 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01423 1089 CDD NF-X1-zinc-finger 545 593 - -
Bach1g01423 1089 MobiDBLite consensus disorder prediction 1075 1089 - -
Bach1g01423 1089 ProSiteProfiles Zinc finger PHD-type profile. 110 171 IPR019787 -
Bach1g01423 1089 CDD NF-X1-zinc-finger 392 440 - -
Bach1g01423 1089 CDD NF-X1-zinc-finger 334 379 - -
Bach1g01423 1089 CDD NF-X1-zinc-finger 636 685 - -
Bach1g01423 1089 MobiDBLite consensus disorder prediction 15 69 - -
Bach1g01423 1089 SMART znfxneu3 280 299 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 647 668 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 608 638 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 344 363 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 402 421 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 225 243 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 555 573 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 SMART znfxneu3 498 517 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 MobiDBLite consensus disorder prediction 1036 1089 - -
Bach1g01423 1089 ProSiteProfiles Zinc finger RING-type profile. 113 169 IPR001841 -
Bach1g01423 1089 MobiDBLite consensus disorder prediction 1 95 - -
Bach1g01423 1089 MobiDBLite consensus disorder prediction 70 88 - -
Bach1g01423 1089 CDD RING-CH-C4HC3_NFX1-like 112 169 - -
Bach1g01423 1089 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 47 999 IPR034078 GO:0003700
Bach1g01423 1089 SUPERFAMILY RING/U-box 102 172 - -
Bach1g01423 1089 CDD NF-X1-zinc-finger 202 263 - -
Bach1g01423 1089 MobiDBLite consensus disorder prediction 1036 1071 - -
Bach1g01423 1089 Pfam NF-X1 type zinc finger 498 515 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 227 242 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 460 471 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 404 419 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 608 623 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 280 298 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 640 657 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 344 361 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 Pfam NF-X1 type zinc finger 555 572 IPR000967 GO:0005634|GO:0008270
Bach1g01423 1089 CDD NF-X1-zinc-finger 270 318 - -
Bach1g01423 1089 CDD NF-X1-zinc-finger 488 531 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Bach1g01423 zf-NF-X1 53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01423 K12236 - qsa:O6P43_005222 1823.91