Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01417 ATGGTATTAGGCTGGGGAAGAAGGAAGAACACCCACCGGCGGGGGCGCAAACCAGAAATGGAGCTGGTAACTCCTAACCATTTCAGGTGCCCAATTTCTCTTGATTTGATGAAAGATCCTGTGACTTTGTCTACTGGGATCACCTATGATAGAGAAAGCATTGAAAGGTGGTTCGAAGATGGGAATTACACATGCCCTGTTACCAATCAGATTCTGAGAAACTTCGATCTGATTCCCAACCATACACTTAGAATAATGATTCAAGAATGGTGTGTAGATAATAAGCAATATGGGGTTGAGAGAATCCCAACTCCAAGAATACCCATCACCCCAATTGAGGTCTCTGAAGTTCTCTTGCATGTGAAGGCCTCTGCTAGACGCTTAGATCCATATGGGTGCTTAGAATTAGTGCAGAAAATAGAGAGGTGGGGTGAAGAGAGTGAGAGAAACAAGAGGTGTTTAGTAGAGAATGGAGCTCCTGGTGTATTGGCCTCTGCATTTGATGCTTTTGCTAATGACTCTGTAGAAATGCATGTGGGTGTTTTAGAAGAGATTTTATCTGCCCTCAATTGGACATTTCCTCTGCAATTAGAAGCCCAAAAATGTTTGGGATCTAAGGCTTCTTTACGTTGCATGGTTTGGTTTTTGAAGCACCAAGATCTTTCAGGGAAGCACAAGGCGATTGTTGCTCTCAAGGAGCTTCTTTCTTTTGGCGATAAACAGCACTTGGAGGCGCTGGCAGAAATTGAAGGAGTCAATGAGTTATTGGTGGGATTTATTAACAGAAGAATCTCCCCAACTATTACAAAAGCTTCATTGGCTGTGGTCTTGTACATGGTTTCATCTTCTTATCCTTCTTGTGAGAAGATGAAATTGGCATTCATTGAAGCTGAGCTAGTTCCTCTAGTGTTGGAGATTCTTATTGACTCAGAAAGGAGCCAATCAGAGAAGGCTTTGGGTATTCTGGACTCGCTCTGCAGTTGTGAACAAGGGAGAGAAAAAGCTTATGGCAATGCTCTAACGATTCCTGTGTTAGTGAAGAAAATTTTGCGAGTCTCAGCATTAGCCACAGATTACTCTGTTTCTGCTATTTGGAAGCTCTGCAAGAATGGAGAGAATGAAGGAAGAAGACTTCTAGTTGAGGCACTTCAAGTTGGTGCCTTTCAGAAGCTCTTGTTAGTATTGCAGGTTGGTTGTGGCGATGACACCAAAGAGAAAGCAACCGAGCTTCTAAAATTGTTGAATCCTCACAGGGCTGGCTTGGAATGCACAGAGACAGCAGATTTCAAGAATCTCAAGAGATCATTCTGA 1311 0.4294 MVLGWGRRKNTHRRGRKPEMELVTPNHFRCPISLDLMKDPVTLSTGITYDRESIERWFEDGNYTCPVTNQILRNFDLIPNHTLRIMIQEWCVDNKQYGVERIPTPRIPITPIEVSEVLLHVKASARRLDPYGCLELVQKIERWGEESERNKRCLVENGAPGVLASAFDAFANDSVEMHVGVLEEILSALNWTFPLQLEAQKCLGSKASLRCMVWFLKHQDLSGKHKAIVALKELLSFGDKQHLEALAEIEGVNELLVGFINRRISPTITKASLAVVLYMVSSSYPSCEKMKLAFIEAELVPLVLEILIDSERSQSEKALGILDSLCSCEQGREKAYGNALTIPVLVKKILRVSALATDYSVSAIWKLCKNGENEGRRLLVEALQVGAFQKLLLVLQVGCGDDTKEKATELLKLLNPHRAGLECTETADFKNLKRSF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01417 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 101 IPR013083 -
Bach1g01417 436 Gene3D - 120 415 IPR011989 -
Bach1g01417 436 ProSiteProfiles U-box domain profile. 23 97 IPR003613 GO:0004842|GO:0016567
Bach1g01417 436 PANTHER WDSAM1 PROTEIN 21 415 IPR045185 GO:0061630
Bach1g01417 436 SUPERFAMILY RING/U-box 21 100 - -
Bach1g01417 436 FunFam RING-type E3 ubiquitin transferase 24 95 - -
Bach1g01417 436 SMART Ubox_2 27 90 IPR003613 GO:0004842|GO:0016567
Bach1g01417 436 CDD RING-Ubox_PUB 25 77 IPR045210 -
Bach1g01417 436 SUPERFAMILY ARM repeat 143 414 IPR016024 -
Bach1g01417 436 Pfam U-box domain 25 95 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01417 Bach-Chr1 27617068 27618378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01417 17 436 U-box Gene Family AT5G37490 45.991 4.52e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01417 - - qsa:O6P43_008457 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01417 1 27617068 27618378 Bach1g01417 1 27617068 27618378 BWGD