Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01404 ATGTTAGCCAATAACTCCCCATCTTCATTAGTTCCCACTTCTGAGCCATTCTCCTGCGCAGAGAATGCTGCAGCTACTACAAATAAAAGGAAGAGAAGGCCTGCAGGAACACCAGATCCGGATGCAGAGGTGGTGTCCCTCTCACCCAAGACTTTATTGGAATCTGATCGTTATGTGTGTGAGATCTGCAACCAGGGATTCCAGAGGGACCAGAACCTGCAGATGCACCGGCGACGGCACAAGGTGCCCTGGAAGCTATTGAAGAGGGAGACGCCGGTGGTGAGGAAGAGAGTCTTCGTGTGTCCTGAGCCAACTTGTTTGCATCATGACCCTTGTCATGCCCTTGGTGATCTTGTTGGGATAAAGAAGCATTTCAGAAGGAAACACAGCAATCACAAACAATGGGTCTGCGAGAGATGCTCTAAAGGCTATGCAGTGCAGTCTGATTACAAAGCCCATCTCAAAACCTGTGGCACCCGAGGCCATTCCTGCGATTGTGGCCGCGTTTTCTCAAGGGTGGAGAGCTTTATTGAACACCAAGATACTTGCAACATGGGGCATCTCCGGCCAGAATCACAGCCATTGCAACCTGCGGCATGTTTGTCTCGAACCGCTTCGAGCCCGAGCCCATCCAGCGAAACCAATTTCAGCACAGGCCCATGGCCAGGTTTAGTAATGCCAAAACCACCAGCAGAACCCTCATTCTTGAACAACAATAATCCTTCTGCTGAAACCTCTTCCAAGAACAAGAACAAGAAGAAGCTGTTCCCGAACTTGGAGCTTCAGCTATCCACTATCACTACATCGAATCCCATTGAAACAGTAGCAGTTTCACCCAAGAGAGGTGAAACCCATTCAACCCAGTTGCAGCTTTCAATTGGGTCATCGGAGATAAGTGAGAAAAACGAATCAAACAATAGGAATTCACCAAAGGAAAGCAGCAACAGCAGCGAGAAACCAGGAGGAGGTGGTGGTGCAGCGGCGGCGTTGAGGGTTCAAGAGCAAGCAAGGGAGCATCTGAGGATAGCCATGGCGGAGAAGGCGTATGCCGAGGAAGCAAGGAAGCAAGCCAAGAGGCAGATTGAACTGGCAGAGCAAGAGTTCTCAAACGCCAAGAGAATTAGACAACAAGCGCAAGCTGAACTCGACAAAGCTTATGCATTAAGAGAACATGCAATCAAGCAGATAAATTCCACTATGCTTCAAATCACTTGCCATGCTTGCAAGCAGCAATTTCAAGCACGAACGACAACAACAACTACAATTTCTGCAACTCCTCTTCCCCCTGACGAGAACTCATTGGTACTGAGCTACATGTCGTCTGCTATAACAACAGAAGGTGGCGAAGTAGAGAAAAACGACCACGGAAAAGATCATGCCAAAATCACCACTAACTCCTAG 1401 0.4868 MLANNSPSSLVPTSEPFSCAENAAATTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCNMGHLRPESQPLQPAACLSRTASSPSPSSETNFSTGPWPGLVMPKPPAEPSFLNNNNPSAETSSKNKNKKKLFPNLELQLSTITTSNPIETVAVSPKRGETHSTQLQLSIGSSEISEKNESNNRNSPKESSNSSEKPGGGGGAAAALRVQEQAREHLRIAMAEKAYAEEARKQAKRQIELAEQEFSNAKRIRQQAQAELDKAYALREHAIKQINSTMLQITCHACKQQFQARTTTTTTISATPLPPDENSLVLSYMSSAITTEGGEVEKNDHGKDHAKITTNS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01404 466 Gene3D Classic Zinc Finger 45 131 - -
Bach1g01404 466 SMART c2h2final6 135 162 IPR013087 -
Bach1g01404 466 SMART c2h2final6 58 80 IPR013087 -
Bach1g01404 466 SMART c2h2final6 99 129 IPR013087 -
Bach1g01404 466 Coils Coil 340 395 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 274 320 - -
Bach1g01404 466 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 409 IPR031140 -
Bach1g01404 466 SUPERFAMILY beta-beta-alpha zinc fingers 55 81 IPR036236 -
Bach1g01404 466 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Bach1g01404 466 MobiDBLite consensus disorder prediction 274 328 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 445 466 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 197 219 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 448 466 - -
Bach1g01404 466 FunFam protein indeterminate-domain 12-like 37 105 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 1 45 - -
Bach1g01404 466 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Bach1g01404 466 MobiDBLite consensus disorder prediction 196 255 - -
Bach1g01404 466 MobiDBLite consensus disorder prediction 1 25 - -
Bach1g01404 466 Pfam Zinc finger, C2H2 type 58 80 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01404 Bach-Chr1 27488746 27491074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01404 21 451 C2H2 Transcription Factor Family AT2G01940 55.830 2.81e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g01404 zf-C2H2 0.0044 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01404 K25871 - gmx:100800187 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01404 1 27488746 27491074 Bach1g01404 1 27488746 27491074 BWGD
Bach1g01404 1 27488746 27491074 Bach1g01404 1 27488746 27491074 ECH