Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01396 TATACACTCACAAGGGAGGGTTTGTTAGCCAAAACGTTTGCATCAATCGAAGGTGTAAGGTCTGTCCAAACCCTCCACACTCTAACGGAAAACACTTTCCCATCTTCCCAACCATATATTCTCTCTTATCTATTTCCTTTCCCCCTGTCTTCATTAATAATTTCCCTTCCCTTACTCTCATCCTCCCCTCTCTCTCTCTCTGTGCTTTAATATTCTTTCCATCGATCATAGCTTGGTGTTCATAAACATAGCTTATCAGTTCTGGTTAAGCCAGAGGAAGAGGAGTAGCCTAGTCTTGTTCTAGGGTTTCCTGTTCTCCTTTCTTTTCTGCTGTTTCCTTTGTACTTGTGTTCTCTAGCTCTTTTTGAGGGGATATGTGTAGTAGAGGCCATTGGAGGCCAGCTGAAGATGAGAAGCTTCGCGAGTTGGTTGAACGATATGGGCCCCATAATTGGAACGCCATAGCTGAAAAGCTCCGAGGAAGATCAGGTAAGAGCTGCAGGTTGAGGTGGTTTAATCAACTAGACCCAAGAATTAATAGAACTCCATTCACAGAGGAGGAAGAAGAGAGGCTTTTAGCTTCTCATCGGATTCATGGGAATAGATGGGCTGTAATTGCAAGGTTTTTCCCTGGACGGACTGATAACGCTGTCAAGAATCACTGGCATGTTATGATGGCGAGGATTCGTCGAGAAAGATCCAAACTAAATGCAAAACGGCCTCTTAACCAGAGAAAGTTTTCTCCTGGCCACGAGGATCAGACAAATTGTGATACAAGGAATTTTCCTTCCTCTTTTGTTGAGAAATACTATGAAAAATATGGCCCTCCTTGTATCACGTATAACCCTTTCCAACTTCCCAAGCAGCTTTACTTTCAAATGCCAAGTTCTTGTCCAACAATGCTTGAAGATAGAAGTCAATCAGTTGAGTTCTATGATTTTCTTCAAGTGAATACTGATTCAAACAGAAGTGAAGTGACAGACAATGCCAGAAGAGATGAGGACGAAGTCAATCAAGATGCTGTTGGACAAGAGAGCAAGCAGGATGGTGTTCCATTCATCGATTTTTTATCTGCTGGAAGCTGATGCTAACATCTGTACGTGTAGAAGAATCACTTGCATATTTGTAATGAGCCTGACTAGTCAAAGACTCACCTAGGTGGCTAGATGCATTGCATGCATATGTAACACAAAGAAATGTATTTAAGAGATATATATATATTCACTTGTAAGATGTAAACGAGTGCATTTTGAGAAAGCTCCATATTTC 1269 0.4145 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLLASHRIHGNRWAVIARFFPGRTDNAVKNHWHVMMARIRRERSKLNAKRPLNQRKFSPGHEDQTNCDTRNFPSSFVEKYYEKYGPPCITYNPFQLPKQLYFQMPSSCPTMLEDRSQSVEFYDFLQVNTDSNRSEVTDNARRDEDEVNQDAVGQESKQDGVPFIDFLSAGS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01396 236 Pfam Myb-like DNA-binding domain 7 67 - -
Bach1g01396 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Bach1g01396 236 FunFam MYB transcription factor 4 55 - -
Bach1g01396 236 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Bach1g01396 236 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Bach1g01396 236 MobiDBLite consensus disorder prediction 197 223 - -
Bach1g01396 236 SMART sant 55 103 IPR001005 -
Bach1g01396 236 SMART sant 3 52 IPR001005 -
Bach1g01396 236 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Bach1g01396 236 Gene3D - 4 55 - -
Bach1g01396 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Bach1g01396 236 MobiDBLite consensus disorder prediction 200 217 - -
Bach1g01396 236 CDD SANT 7 48 IPR001005 -
Bach1g01396 236 CDD SANT 58 101 IPR001005 -
Bach1g01396 236 Gene3D - 57 124 - -
Bach1g01396 236 PANTHER MYB PROTEIN-RELATED 4 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01396 Bach-Chr1 27401478 27403455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01396 1 236 MYB Transcription Factor Family AT1G17950 55.777 6.57e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01396 Myb_DNA-bind_6 8.3e-17 CL0123