LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g01395	GAAAAAGACAAGTATGAGTGCTTCGACGACGAGGAAGAAGGTGCAGAGGAAGTGTAAGATCAGAGGGTACACGCTGAAAGTAGATGCTCTCGATGAGATCCTTTCTTTCGTCTCTCGGTTCGAGGGCTCTGATGAAGACGAAGCCATTGATCTCCTCCTCGATCAGCTCGAACATGAATCCTTGAAATCTTCTATCATTGACAAGGAACCGGTTCAGCGAGTAGTGAACCTTCTATTGGAAGCCGAGGCAGCTGTGGAGGAAAGCACTGATGCTGTTGGTAGTGGTTCGGCCCTTCGCGTCGTTGATGCGTTCTTAGTTCCTAAATTTCGATACGACTCGATCAAAAAGCAATTCCATGAGCACACTGGCAACTTACCTATCCATGGGGAAGCATCAGCAAAATCAGCCCTGTACAGGGATAGATTTCTGTTGCTATTCCAGAGGCTCTCCCGTGACCAGCACTTTTCAAAGCCTGCTTTCAATTCTGAACTTTCACATTTTGGAAGCTGTGAGATATCTCCAATTCAATCTCTGGTTGGGCAAACTGGTAGAAGATGGGTCATGGGAGTAATATCTCAGTTGGAGGATGGCCATTTTTATTTGGAAGACCTTACTGCTTCAGTTGAAATTGATTTGTCTAATGCTATATCCTTTTTTGATTCAAGATTACTCATCTTGAAATTCATTATGAATTTCTTTGACAAGCAATACAAGATAACTACAGGATTCTTTTCAGAGAACACAATAGTTGTAGCAGAAGGCGAGATGCTTGTGGAGGGTATTTTTCAGGTTTTAACATGTGGATTTCCCCCATTGGAGGATAGAGATAAGTCACTTAAATTAATTTCAGGGCAAGACTTCTTTGGTGGTGGTAGTTTTACAAAAGAGGAAATGGTGAGAATGGCAGAGATGGAAAAGCAAGCAGTAAATGACATGTTTGTTATATTGTCTGAAATCTGGCTTGACAATGAAGAGGCTATGGAAAAGCTGGAGACTGTACTAAATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCTTTATTCGTTTTCATGGGAAATTTCTGTTCTCTCCCTTGTAACATTTCCTTTAACTCTTACTCAAGCCTCAGATTGCAATTTGGCAAGCTCGGGCAAATGATTGCTGCCCACCCACGGCTAAAAGAGCACAGCCGGTTTCTGTTTATTCCTGGTCCTGATGATGCAGGCCCGTCAGCATCAGTTCTTCCTAGGTGTGCTCTACCAAAATATTTAACTGAGGAGCTCCAAAAGCATATTCCCAATGCCATATTTTCAAGCAATCCTTGCAGGATCAAGTTCTACAACCAAGAAATTGTATTTATCCGCCAGGATCTGCTGTATAGAATGCGCCGTTCTTGTTTGGTGCCACCTTCCATGGATGAAACAGATGATCTTTTTCAGCATCTTGTTGCTACCATGACCCACCAGAGTCATCTCTGCCCACTCCCTCTAACTGTACAACCCATCATATGGAATTACGATCACTGTCTTTATCTTTATCCAACCCCAAATACGATAGTTTTAGGAGACAGAAGTGAGCAGAAGGCATTCAAATACACTGGAATCACTTGTTTTAATACTGGTTCCTTCTCAATTGACAGCACCTTTGTGGCATACCGCCCGTGCTCCCAAGAAGTTGAATTGTCAGCCTTGTAG	1672	0.4288	MSASTTRKKVQRKCKIRGYTLKVDALDEILSFVSRFEGSDEDEAIDLLLDQLEHESLKSSIIDKEPVQRVVNLLLEAEAAVEESTDAVGSGSALRVVDAFLVPKFRYDSIKKQFHEHTGNLPIHGEASAKSALYRDRFLLLFQRLSRDQHFSKPAFNSELSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEIDLSNAISFFDSRLLILKFIMNFFDKQYKITTGFFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSLKLISGQDFFGGGSFTKEEMVRMAEMEKQAVNDMFVILSEIWLDNEEAMEKLETVLNGFESVEVVPSLFVFMGNFCSLPCNISFNSYSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSASVLPRCALPKYLTEELQKHIPNAIFSSNPCRIKFYNQEIVFIRQDLLYRMRRSCLVPPSMDETDDLFQHLVATMTHQSHLCPLPLTVQPIIWNYDHCLYLYPTPNTIVLGDRSEQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL	552

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g01395	552	PIRSF	DNA_pol_epsilon_2	1	223	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Bach1g01395	552	PIRSF	DNA_pol_epsilon_2	225	552	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Bach1g01395	552	Gene3D	-	1	73	-	-
	Bach1g01395	552	Pfam	DNA polymerase alpha/epsilon subunit B	309	515	IPR007185	GO:0003677\|GO:0006260
	Bach1g01395	552	PANTHER	DNA POLYMERASE EPSILON SUBUNIT B	4	552	IPR016266	GO:0003677\|GO:0006261\|GO:0008622

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g01395	17	509	Core DNA Replication Machinery Family	AT5G22110	70.385	0.0	710

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g01395	K02325		-	qsa:O6P43_008430	917.916