Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01344 ATGGATCAGAGAGCATCCGAGGAAAGTGGGCAAAAAGCTTGGAGTTTCAAGTGTACAAAGATACTTCATGGAATTGATAAAGAAATTGCATGTCAGACACCAGAGAAAACCACTGAACCTTTGTCCACAAAATCCAAAGAGGGACAAATCCAGCTTCCTGAGAAATACAGGACCATAGCGGATTTGTTTGATCATATGAGTTGTTCACTGAGGTTACTTAATCTGCGTAAAAAGCCTCCAACTTTTCAAAACATTTGCACTCAGGTTGAAGTTCTGGCCAAAAGAAAATTCTTGTATCCACATCTTGCTCGGATGAAGTATATACTTCCTGAAGCCATTCATATAGATAAGATACTTGTACATGACAAGAAAAGCTTGTGTATGAAGCCAGATTTAAAGATTTCCTTGACATTTGAGGTTGTGGAAGGAAACACTAGCCAATCTGCTTATTTATCTCTTATCAAACTTTTTGGTTCTAGGCTGATTGATTTCTTCTCAACGCATCCTGAGGCTACTGATGTTCCTGAAGCCATACTACCAGAGCCTTTTAGCCAAAGTACCCCTAGCTTGAATTGTGGGGATTTGCCTGTAGATTCTTCAACAGTACTTTCACAAACTTCAGATGAAGTTCAATTTTTGTCAGAGAAATTCCATCCGTATCCCTCTTTTGTTAGACATTTCTCTCAGGAAAATGTTGTTGCCAGGACAGAAAGTGTCCAATGCTTATCAGCTCAGACTACTTTGTCATCATCTGCATCTGATTGCTTGAATAATGAAGAAAATGACAGCAAATGGACTGAGGGATCTACTTTGCATTTGAAATCTGATGCCACGATTAATCAGGATATGGAACGAGGACAGCAGGAGGAATCACGTTCTATGTGTTTTCAACCAAGTATTATTAATACACCAGCACATCAGATCTGCCCTTCTTACTCTCTCAGTTGTGGTAGTTCTGAAAGCCGTAATATGAAGTTTGCCTCACACACTGATAGTTTAATGACTGCGACACCTGTGCAGTCAGCACCTAGGAGATTGATATCCAGCTCAGATGTTAAAGTTCAGACTGTGACGACCCTGAAATCAGCTTCATGTTATAAACCTGCAAAAAGAGTTCTTGACTTTTCACACATGCAAGGTGATAATGATGCATTGGATCTTTGTGAAAACAAGCTAGAATCTAGCAGAGTTGTGCGTGATAACATACCTGATGCAAGTCAAGGAGCTTCTGTGGGGTGCGAAACTTCCGGTTCTGTTGTTCTACCCCGGGAGGTAGAAGAGAGCCTTGGTTGTTCTCACGAGAAAACCAACCAAATGCAAGCTGGTTTAGGAACAGAACAGCAGATCTCTTCATCATTGATTGACCTTGTTGATGAGATTCACTCTATATTTTGTTCTGTCAAATTCTCTCCAATTACAAAAGCAGAATTGCTGCACAAGATAATTATGAATAGTCTAGACTATGTTGAGACAAGAGAAGTTGAAGAAAGAGTAGAGATTCTTGAAAAGGTTGTGCCAGATTGGATCTGTAAGAAATTGGTGCCTACTGGAGATGTAATATACCGCATCAAGAAAATGTCAGATTTGGACTCCGTTCGATCAAAGCTTTGTAGCAATGGTACCATGGGAGCTGAGTAA 1638 0.4011 MDQRASEESGQKAWSFKCTKILHGIDKEIACQTPEKTTEPLSTKSKEGQIQLPEKYRTIADLFDHMSCSLRLLNLRKKPPTFQNICTQVEVLAKRKFLYPHLARMKYILPEAIHIDKILVHDKKSLCMKPDLKISLTFEVVEGNTSQSAYLSLIKLFGSRLIDFFSTHPEATDVPEAILPEPFSQSTPSLNCGDLPVDSSTVLSQTSDEVQFLSEKFHPYPSFVRHFSQENVVARTESVQCLSAQTTLSSSASDCLNNEENDSKWTEGSTLHLKSDATINQDMERGQQEESRSMCFQPSIINTPAHQICPSYSLSCGSSESRNMKFASHTDSLMTATPVQSAPRRLISSSDVKVQTVTTLKSASCYKPAKRVLDFSHMQGDNDALDLCENKLESSRVVRDNIPDASQGASVGCETSGSVVLPREVEESLGCSHEKTNQMQAGLGTEQQISSSLIDLVDEIHSIFCSVKFSPITKAELLHKIIMNSLDYVETREVEERVEILEKVVPDWICKKLVPTGDVIYRIKKMSDLDSVRSKLCSNGTMGAE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01344 545 CDD Cdt1_m 34 187 IPR014939 -
Bach1g01344 545 Gene3D - 444 540 IPR038090 -
Bach1g01344 545 SUPERFAMILY "Winged helix" DNA-binding domain 48 183 IPR036390 -
Bach1g01344 545 PANTHER DNA REPLICATION FACTOR CDT1 34 537 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bach1g01344 545 SMART CDT1_2 52 181 IPR014939 -
Bach1g01344 545 Pfam DNA replication factor CDT1 like 52 116 IPR014939 -
Bach1g01344 545 Pfam DNA replication factor Cdt1 C-terminal domain 437 509 IPR032054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01344 Bach-Chr1 26860829 26864366 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01344 333 536 Core DNA Replication Machinery Family AT2G31270 27.149 4.46e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01344 K10727 - gmx:102670055 530.406