Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01341 ATGGATCAGAGAGCATCCGAGGAAAGTGGGCAAAAAGCTTTGAGTTTTAAGTGTACAAAGATACTTCATGGAATTGATAAAGAAATTGCATGTCAGACACCAGAGAAAACCACTGAACCTTTGTCCACAAAATCCAAAGAGGGACAAATCCAGCTTCCTGAGAAATACAGGACCATAGCGGATTTGTTTGATCATATGAGTTGTTCACTGAGATTACTTAATCTGCGTAAAAAGCCTCCAACTTTTCAAAACATTTGCACTCAGGTTGAAGTTCTGGCCAAAAGAAAATTCTTGTATCCACATCTTGCTCAGATGAAGTATATACTTCCTGAAGCCATTCATATAGATAAGATACTTGTACATGACAAGAAAAGCTTGTGTATGAAGCCAGATTTAAAGATTTCCTTGACATTTGAGGTTGTGGAAGGAAACACTAGCCAATCTGCTTATTTATCTCTTATCAAACTTTTTGATTCTAGGCTGATTGATTTCTTCTCAACGCATCCTGAGGCTACTGATGTTCCTGAGGCCATACTACCAGAGCCTTTTAGCCAAAGTACCCCTAGCTTGAATAGTGGGGATTTGCCTGTAGATTCTTCAACAGTACTTTCACAAACTTCAGATGAAGTTCAACTTTCGTCAGAGAAATTCCATCCGTATCCCTCTTTTGTTAGACATTTCTCTCAGGAAAATGTTGTTGCCAGGACAGAAAATGTCCAATGCTTATCAGCTCAGACTACTTTGTCATCATCTGCATCTGATTGCTTGAATAATGAAGAAAGTGACAGCAAATGGACTGAGGGATCTACTTTGCATTTGAAATCTGATGCCATGATTAATCAGGATATGGAACGAGGACAGCAGGAGGAATCATGTTCTATGTGTTTTCAACCAAGTATTATCAATACACCAGCACATCAGATCGGCCCTCCTTACTCTCTCAGTAGTGGTAGTTCTGAAAGCCGTAATATGGAGTTTGCCTCACCCACTGATAGTTTAATGACTGCGACACCTGTGCAGTCAGCACCTAGGAGATTGATATCCAGCTCAGATGTTAAAGTTCAGACTGTGACCACCCCGAAATCAGCTTCATGTTATAAACCTGCAAAAAGAGCTCTTGACTTTTCACACATGCAAGTTGATAATGATGCATTGGATCTTTGTGAAAACAAGCTAGAATCTAGCAGAGTTGTGCATGATAACATACCTGATGCAAGTCAAGGAGCTTCTGTGGGGTGCAAAACCTCCGGTTCTGTTGTTCTACCCCAGGAGGTAGAAGAGAGCCTTGGTTGTTCTCACGAGAAAACCAACCAAATGCAAGCTGGTTTAGGAACAGAACAGCAGATTTCTTCATCATTCAATGACCTTGTTGATGTGATTCACTCTATATTTTGTTCTGTCAAATTCTCTCCAATTACAAAAGCAGAATTGCTGCACAAGATAATTATGAATAGTCTAGACTATGTTGAGACAAGAGAAGTTGAAGAAAGAGTAGAGATTCTTGAAAAGGTTGTGCCAGATTGGATCTCTAAGAAATTGGTGCCTACTGGAGATGTAATGTACTGTTGGGTCTCCTTCTGTTGTTTGTTGTTGTGCTTGTCTTTGTGCATCAAGAGAGTCAGTCTTTTTGACTACAGTTTTTTGTGGAATTGCAACATCAAGAAAATGTCAGATTTGGACTCCGTTCGATCAAAGCTTTGTAGCAATGTTACCATGGGAGCTGATTCATGCAATCTATCAGATGCATTTATTCTTATGTGCCTAAGTGGTTTTCTCAACGTGAGTTATTTAGATCTATCTTGCAACAATTTTACAATCCTTCCGGAATGCATTAAAGAATGTGTCAACTTGAAGACTCTTTTGTTACAAAATTGCAAGCAACTTCAAGAAATTTCAGGCCTTCCACCAAATGCAGAAGAAATAGATGCATTGAACTGCACATCCTTGAGTTTCCAATCATCAAACTTATTATTGAGCCAGGTCTTTCGCGAGGGTGGGATGACAAATGTAATGTTGCCAGGATCCGAGATTCCAGAATGGTTTGATCACTCCAGCTGTGAAAGTTCAATATCTTTGTGGTTTCGCAAGAAAATCCCTGAGATTGCTGTATGTTTTGTTCTGGGAACATCGGAAAAGCCAATTCATCGGGTTTGGGCTAGCTTTGGTGTGCTTATTAACGGCATTCATTGGCCAGTAACAGCATCCCAAAGTTGTTACAATCGGTCAATTGAGACAGAGCATGTATGGCTGGTTGATCTACGAGTTCAAGTTGAGGGTAGCAAGCCCAAAATATTTAAGGATGTTTGGAACCGTATGAAAATTTCATGTGTGGATTGTACAGATGTTTGTTCATCATCAACAGAGAAGACAATTGTAATTTGTTATGGGATTCATGTATACGGGCATGAGAGCATCATGGATGATGTCCTGCTCGAAGTTGGTAACCCTCCAACAGTCCAGAATGCTACTTCTAAAAGATTTTTTGAAGATAAATACATGACTGTAGAGCATGATGAGAACTTGGAGCAAAGTGGTTTCCCACGGAAGAGAAGGCTGCGTATGTACTGA 2568 0.3995 MDQRASEESGQKALSFKCTKILHGIDKEIACQTPEKTTEPLSTKSKEGQIQLPEKYRTIADLFDHMSCSLRLLNLRKKPPTFQNICTQVEVLAKRKFLYPHLAQMKYILPEAIHIDKILVHDKKSLCMKPDLKISLTFEVVEGNTSQSAYLSLIKLFDSRLIDFFSTHPEATDVPEAILPEPFSQSTPSLNSGDLPVDSSTVLSQTSDEVQLSSEKFHPYPSFVRHFSQENVVARTENVQCLSAQTTLSSSASDCLNNEESDSKWTEGSTLHLKSDAMINQDMERGQQEESCSMCFQPSIINTPAHQIGPPYSLSSGSSESRNMEFASPTDSLMTATPVQSAPRRLISSSDVKVQTVTTPKSASCYKPAKRALDFSHMQVDNDALDLCENKLESSRVVHDNIPDASQGASVGCKTSGSVVLPQEVEESLGCSHEKTNQMQAGLGTEQQISSSFNDLVDVIHSIFCSVKFSPITKAELLHKIIMNSLDYVETREVEERVEILEKVVPDWISKKLVPTGDVMYCWVSFCCLLLCLSLCIKRVSLFDYSFLWNCNIKKMSDLDSVRSKLCSNVTMGADSCNLSDAFILMCLSGFLNVSYLDLSCNNFTILPECIKECVNLKTLLLQNCKQLQEISGLPPNAEEIDALNCTSLSFQSSNLLLSQVFREGGMTNVMLPGSEIPEWFDHSSCESSISLWFRKKIPEIAVCFVLGTSEKPIHRVWASFGVLINGIHWPVTASQSCYNRSIETEHVWLVDLRVQVEGSKPKIFKDVWNRMKISCVDCTDVCSSSTEKTIVICYGIHVYGHESIMDDVLLEVGNPPTVQNATSKRFFEDKYMTVEHDENLEQSGFPRKRRLRMY 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01341 855 SMART CDT1_2 52 181 IPR014939 -
Bach1g01341 855 MobiDBLite consensus disorder prediction 306 340 - -
Bach1g01341 855 Pfam DNA replication factor CDT1 like 52 116 IPR014939 -
Bach1g01341 855 Pfam DNA replication factor Cdt1 C-terminal domain 437 511 IPR032054 -
Bach1g01341 855 Gene3D - 444 525 IPR038090 -
Bach1g01341 855 CDD Cdt1_m 34 195 IPR014939 -
Bach1g01341 855 SUPERFAMILY "Winged helix" DNA-binding domain 48 183 IPR036390 -
Bach1g01341 855 Gene3D Ribonuclease Inhibitor 537 691 IPR032675 -
Bach1g01341 855 PANTHER DNA REPLICATION FACTOR CDT1 35 567 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bach1g01341 855 SUPERFAMILY L domain-like 534 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01341 Bach-Chr1 26779490 26788654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01341 333 534 Core DNA Replication Machinery Family AT2G31270 26.147 4.07e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01341 K10727 - qsa:O6P43_005403 508.064