Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01301 ATGTTTAGAAGATTTCAAGTTGATGAGTTACTTGGCTATAATGGTCTGGATGATTCCACCCCGCTCAAACACTTGTTAGGATCAACCGAAGTGATACATGTCAAAGGAAGATGCATTGGAAAGAATGGAGTGTGTAAATTCCGGATGGAAAGAGGAATTGAGAGGTGGACTGTGGATTGCAGCTGCGGAGCTAAGGATGATGATGGGGAGAGAATGTTGGCTTGTGATTCATGTGGAGTGTGGCGACACACTAGGTGTTCTGACATTCATGACGCAGATCCCGTCCCTGCTCGGTTTGTTTGCCCAAGATGTCAAAACTCTGACTCAAAACCTAAACCTAATGGCCACTGTAAAGACGAGACTGTGACTAACATTAGTGCTACCAGTAGCTGCTTTGGAAATGGCTTGCCACTGCCTTCTGATGTAAGGTGA 432 0.4537 MFRRFQVDELLGYNGLDDSTPLKHLLGSTEVIHVKGRCIGKNGVCKFRMERGIERWTVDCSCGAKDDDGERMLACDSCGVWRHTRCSDIHDADPVPARFVCPRCQNSDSKPKPNGHCKDETVTNISATSSCFGNGLPLPSDVR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01301 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 111 IPR013083 -
Bach1g01301 143 ProSiteProfiles Zinc finger PHD-type profile. 57 107 IPR019787 -
Bach1g01301 143 SUPERFAMILY FYVE/PHD zinc finger 48 108 IPR011011 -
Bach1g01301 143 Pfam PHD-finger 60 106 IPR019787 -
Bach1g01301 143 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 118 - -
Bach1g01301 143 SMART PHD_3 59 105 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01301 Bach-Chr1 26348701 26349132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01301 58 104 PHD Transcription Factor Family AT5G22260 48.936 6.09e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach1g01301 PHD 6.6e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01301 K26271 - gmx:100818189 248.44