Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01258 ATGCCTTCGCTTCCCCTCTCTGATGCCGTTTTTTCTGAGAGCCCCAAAGATAAGGAAAAGGAGAAAAAGAAGAAGATGAAGAACCAGACTCCAATCGAAGCTTCAGAACTCGAAGGATCGATTGGCAAGAAGAGTAAGAAAATTTCCAAGCTTGGGAGTACTCCGAAGGCGTCTGATTCTGAGGATGAGGGATTTTCGGACAATAAGGTGAAGAAGAAGAAAAAGGAGAGCAAAAAGCGTAAAGCTTTTGAAGCTGAGAATATGGAGGATGGGGATGAAGATAAGAGTGAGACTAGCTCTGAGCTTGTTGAGCCAGAAACCTCGAAGCCCAAGACTGCTGAGAAGAAGAAGAAGAAAAAGGCAAAGCTGGAGGAGTTTGAAGTGGAGGGAGAGGAGGTTGAGAAGGAGGATCCCAATGCAATTTCTAATTTCAGGATATCGGAGCCGTTGAGAGAAAAGTTGAAGGAAAAGGGAATTGAATCTCTGTTCCCCATTCAGGCCATGACTTTCGACACCATTCTCGATGGGTCTGATTTGGTTGGTCGGGCTCGCACTGGTCAGGGTAAAACTCTGGCATTTGTGTTGCCCATTTTAGAATCTTTGACAGATGGTCCGGTAAAAACATCAAGAAAGACTGGATATGGGAGAGCACCAAGCGTTCTTGTGCTTTTACCCACCAGGGAATTGGCGAATCAGGTTTTTGCTGATTTTGATGTTTATGGAGGGGCACTTGGATTGAGTTGTTGCTGTTTATACGGTGGGGCCTCATATCAAGCTCAAGATATTAGGCTCAAGAGAGGTGTTGATATTGTTGTTGGAACACCGGGCCGCATAAAGGATCATATAGAGAGGGAAAATATTGATCTGAGCCAATTAAGGTTCCGCGTCCTTGATGAGGCAGATGAAATGCTGAAAATGGGTTTTGTTGAAGATGTTGAACTCATTCTGGGTAAAGTAGGGGATGCTAGTAAAGTTCAGACGCTCCTTTTCAGTGCTACTTTGCCAGATTGGGTTAAACATATTGCCGCAAAATTTCTAAAACCAGATAAGAAAATTGCTGACCTTGTAGGGAATCAGAAAATGAAGGCTAGCACCAATGTTAGGCATATTGTTATGCCATGCTCTAGTTCTGCCAGGTCCCAGCTTATACCTGACATTATTCGCTGTTACAGCAGTGGAGGTCGGACAATTATATTCACTGAGACAAAGGAGTCTGCATCTGAGCTTGCAGGGTTATTGCCTGGAGCACGAGCTCTGCATGGTGACATACAGCAGGCACAACGAGAGGTTACTTTGTCTGGCTTCAGGTCTGGGAAATTCATGTTATTGGTGGCCACAAATGTGGCAGCTCGGGGTTTAGACATCAATGATGTTCAGTTAATTATTCAGTGTGAGCCTCCACGAGACGTAGAAGCCTATATACATCGATCTGGGCGAACAGGAAGAGCAGGTAAAACTGGAGTTGCCGTTATGCTTTATGATCCAAGAAGGTCAAATGTATCAAAAATAGAAAGAGAATCAGGTGTGAAATTTGAGCATATATCTGCTCCCCAACCCGCTGACATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAAATGATAACCCAAGTGTCTGATAGTGTGATTCCTGCATTCAAGGCTGCTGCTGAGGAGCTTCTGGATAACTCTGGTTTATCAGCTGTTGAGTTACTCGCAAAAGCTCTTGCTAAAGCTGTTGGTTATACTGAGATAAGGGAAAGATCACTTCTGACTTCCATGGAGAACCATGTCACATTACTTCTAGAGATTGGAAGGCCCATCTACACCCCATCTTTTGCATATGGAGTCCTGAGGAGATTCTTGCCTGAGGAGAAGGTTGAAGCAGTCAAGGGGTTTACTCTCACTGCTGATGGAAACGGTGCTGTATTTGATGTTGCTGCCGAAGATTTAGATACATATCTTTCTGGTCAGGAAAATGCCGCTAATGTGAGCTTAGAGGTGTTGAATGCATTGCCGCAGTTACAAGAAAGAGACCAATCAAGAGGTGGCAGATTTGGTGGTCGTGGTGGTGGGTTTGGTGATCGATATGGCGGTGGTGGTAACAGGTTTGGTGGACGAGGTGGCAGGAATGGTGGGTTTTCGAATCAGAGGAATAATAGGTTTTCCAGTGGGGGCGGGAGAGGTGGTTTCAACAAGGGGGCAAAGAGATGGTAG 2193 0.4523 MPSLPLSDAVFSESPKDKEKEKKKKMKNQTPIEASELEGSIGKKSKKISKLGSTPKASDSEDEGFSDNKVKKKKKESKKRKAFEAENMEDGDEDKSETSSELVEPETSKPKTAEKKKKKKAKLEEFEVEGEEVEKEDPNAISNFRISEPLREKLKEKGIESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLTDGPVKTSRKTGYGRAPSVLVLLPTRELANQVFADFDVYGGALGLSCCCLYGGASYQAQDIRLKRGVDIVVGTPGRIKDHIERENIDLSQLRFRVLDEADEMLKMGFVEDVELILGKVGDASKVQTLLFSATLPDWVKHIAAKFLKPDKKIADLVGNQKMKASTNVRHIVMPCSSSARSQLIPDIIRCYSSGGRTIIFTETKESASELAGLLPGARALHGDIQQAQREVTLSGFRSGKFMLLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGKTGVAVMLYDPRRSNVSKIERESGVKFEHISAPQPADIAKAVGGEAAEMITQVSDSVIPAFKAAAEELLDNSGLSAVELLAKALAKAVGYTEIRERSLLTSMENHVTLLLEIGRPIYTPSFAYGVLRRFLPEEKVEAVKGFTLTADGNGAVFDVAAEDLDTYLSGQENAANVSLEVLNALPQLQERDQSRGGRFGGRGGGFGDRYGGGGNRFGGRGGRNGGFSNQRNNRFSSGGGRGGFNKGAKRW 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01258 730 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 296 304 IPR000629 -
Bach1g01258 730 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 63 553 - -
Bach1g01258 730 MobiDBLite consensus disorder prediction 689 730 - -
Bach1g01258 730 Gene3D - 363 591 IPR027417 -
Bach1g01258 730 Pfam GUCT (NUC152) domain 573 668 IPR012562 GO:0003723|GO:0004386|GO:0005524
Bach1g01258 730 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 170 352 IPR014001 -
Bach1g01258 730 MobiDBLite consensus disorder prediction 1 128 - -
Bach1g01258 730 CDD SF2_C_DEAD 367 493 - -
Bach1g01258 730 MobiDBLite consensus disorder prediction 56 71 - -
Bach1g01258 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 320 IPR027417 -
Bach1g01258 730 SUPERFAMILY RNA-binding domain, RBD 577 660 IPR035979 GO:0003676
Bach1g01258 730 Pfam Helicase conserved C-terminal domain 386 484 IPR001650 -
Bach1g01258 730 Gene3D - 84 353 IPR027417 -
Bach1g01258 730 MobiDBLite consensus disorder prediction 98 128 - -
Bach1g01258 730 Pfam DEAD/DEAH box helicase 163 340 IPR011545 GO:0003676|GO:0005524
Bach1g01258 730 SMART ultradead3 158 370 IPR014001 -
Bach1g01258 730 CDD DEADc 150 347 - -
Bach1g01258 730 FunFam DEAD-box ATP-dependent RNA helicase 7 590 662 - -
Bach1g01258 730 SMART helicmild6 407 484 IPR001650 -
Bach1g01258 730 Coils Coil 116 136 - -
Bach1g01258 730 CDD GUCT_RH7_like 580 665 - -
Bach1g01258 730 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 381 523 IPR001650 -
Bach1g01258 730 MobiDBLite consensus disorder prediction 704 718 - -
Bach1g01258 730 Gene3D - 592 662 - -
Bach1g01258 730 MobiDBLite consensus disorder prediction 12 31 - -
Bach1g01258 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01258 Bach-Chr1 25995992 26001056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01258 176 523 Eukaryotic Initiation Factors Gene Family AT1G72730 31.161 6.27e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01258 K16911 - qsa:O6P43_008295 990.719