Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01247 ATGTTTCCTTCATACCAAGGCAATCAGCTGGTGATCCAGTTTTCTTCTAGCCCCACCGACGAGCAACACGAAATCTCAGAAGATCTGATTTCAGATGATTACGTTTCACTGGATGCTACTGCTTCCGACAAAAGATTGGTTCGCGGCGGACCGAAGAAACTCTTTCATGGGTCTGGTAAGAACCGTGGTCGCCCTTCTGGTGAATACAAGAGGAAGATGTTGAATCATAGGGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTACCCTTTACGCCTCCCTTAGATCCCTTCTCCCGTTTGAATTCATCAAGGGAAAGCGTTCTATGTCGGATCACATGAACGAGGCTGTGAATTATATAAAGCATTTGCAGAAAAATATCGAAGAACTCAGTGGCAAGAGGAATGACCTAAGGAAAATCCCCAGCTCCAATGTAAAAAACCATGAAACTAAACGCACTTCTAGTAGCTTTACTATCCATGAGAATAATGGCCGTGTGGGAATTGAAATTACCAGTGGCTTCGGAGAGGAACATTTGCTCAATTCAGAATTGCTGGAACTACTGTTAGAAGGAGGACTTGAAGTTATTAGCTACCTTTCTACCAAAGTCAATGGCAGATTACTTCAGAGTTTATGGTGTGAGGTTAAGAATTCCAACAGTGTAGATCTAACTGAGCTGAGAAGAAAAGTTCGCAATGTTATTTCATCGTTTGAATGTTCTGACTAGATTTGTCGTTGGAGGCTCAAAACTGGCATTTTTAGGAGTATTCTAACAAACTCCCTTTTCTAACTTGTTAGCACTTGGTTTGGATGAGTTTGCTGCAACGTGCTCTGCTTTGACCATTCTCTTTGTTCTCACAGCTTTTCTTCAAGCAAATCTGTTCAATTTCCAGTTTGTCTCTGCTTGCCCATATTGACAGATGTGCAGCATTTCATTATTTTGGCCTGATTGCGTCTGTAATTGCATGCGGAAGATTAATATCGACATCTCTTCTGCCCATTATGTGTGTATCTGCATATTTTGAATCATGCTGCAAAATGCTTCACTTCGATAAGTTTGATAAGGAAATATCTGGCTGGAATGCAAA 1087 0.4149 MFPSYQGNQLVIQFSSSPTDEQHEISEDLISDDYVSLDATASDKRLVRGGPKKLFHGSGKNRGRPSGEYKRKMLNHREIERQRRQEMATLYASLRSLLPFEFIKGKRSMSDHMNEAVNYIKHLQKNIEELSGKRNDLRKIPSSNVKNHETKRTSSSFTIHENNGRVGIEITSGFGEEHLLNSELLELLLEGGLEVISYLSTKVNGRLLQSLWCEVKNSNSVDLTELRRKVRNVISSFECSD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01247 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 231 - -
Bach1g01247 241 SMART finulus 77 129 IPR011598 GO:0046983
Bach1g01247 241 Gene3D - 64 155 IPR036638 GO:0046983
Bach1g01247 241 MobiDBLite consensus disorder prediction 49 68 - -
Bach1g01247 241 Pfam Helix-loop-helix DNA-binding domain 75 124 IPR011598 GO:0046983
Bach1g01247 241 FunFam Transcription factor bHLH126 64 151 - -
Bach1g01247 241 CDD bHLH_AtORG2_like 72 148 - -
Bach1g01247 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 138 IPR036638 GO:0046983
Bach1g01247 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Bach1g01247 241 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01247 Bach-Chr1 25907930 25909468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01247 76 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 41.818 8.10e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g01247 HLH 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01247 - - gmx:100780888 264.618