Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01246 ATGCTTCCTTTAAACAGAGGGGTGATCCAGATTTCTTCTAGCCCCCACCACCAGCAACACAAAATCTCAGAAGATCTGATTCTGGAAGATTATGTTTCCCTTGATTTCAGTGATTCTGCTAAAAGAGTGGGTGGCAGCCAGCCGAAGAAACTAATTCATGGGTATCATAAGAATAAAAACTATGGTAATCAGTATTCTAGTGAAAGCAAGAAGAAGAAAATGATCCATAGGGAGATTGAGAGGCGAAGGAGGCAACAAATGGCTACACTTTACGCCTCACTTAGATCCCTTCTTCCTATTGAGTTCATCAAGGGAAAGCGTTCAATATCGGATTACATGAATGAATCAGTGAATTATATAAAGCATTTGAAGAAGAATATAAAAGAACTAACTGCCAAGAGAGATGAACTGAAGAAACTCTCCAGTTCCAGTCTGGAAAACCATGACAGCAATAGCTCATCTGGTAGCTTTACCATCCATGAGAATGATGGTATTATTGGAATTGAAATTACTAGTGGCTTTAGAGAGGAAAGTTTCCCCCTTTCAAAATTGCTGAAACTGCTGCTTGAGGAAGGTCTTGAAGTTGTTACTTGCCTTTCCAGTGTAGTCAATGGCAGATTACTTTACAGTGTACAGTGTGAGGTTAGCAATTCCAACAGTTTGGATCTACCTGAGCTGAGAAGGAAAGTTTCCCGTGTTATTCCATTATTTGGAAGTTCTGATTAAATTTGTCGTAGGAGGATCACATACTGGCATTTAATTTGTTGAAGAAATCTAACATTTATCATTTTCTAACTGCTTAGCACTTTGTTTGGAAATTGGGTGAGATTGCTCAGTGTTTATATATGCTATAATGCCTTCTTTTTTGGTTCTTCTGTCTGGTTAACTAGTTAATGAAAATGAGGGAGAAAAGGGAAAACATATATATACTTATCTTCCTGAAATCTTTAATTGGACTTTAAGAATGTATTCGATAGGAGAGAGCATCAGAACAAAAAAGAAATGGAGCGAAATTTGACAAGGTATGCCCAAATATATTCCTCACTTCTACTCTTCAGTATACATTTTATTCACACTCTTGCCAAGCACACCCAAATGTCAGTGAAAAATTTGCATTAATTAAGGAATTAAGTAAACTAGAAACCCTAAAAGTAATTTAGTCTTCTATTCCTGATAGCTTAGGATGTGTAATTTAGTCTCAGTATGTCTATAGTTGTACCTTGTATTCCTGATAGTTCTAGATTATTTGCTTAAAAAATTAGATGTAAATAGTATGGTTGAAATTTTTCGCGGCACGTCTTGAGTAAAAAAGAACTGTTCAGTTACTAAATCTTCTAGATTTGTTTAACCTATGTTATTTATCTTGTTAGCTAGTTTAATTATTTAATAAGAGTGAAGACTATATCTATAGACTACGAGCAAATTAGAATTTGAATGTGTGTGTGTGTATATATATATATTGTTTTCTTTTACACTGATCTGGAGCAATATGTAAAATTAATGGTTGCTTCTCATACGGTAGGATCAAGTATCTAATACTTTTGCTCTGACCATTATCATCTCGTTGGACAAAATAGAACAATCAATCATTTGATGACTCTTTCCTGTGAAATAGTTTTTCCATTTTTATTGTAATTCAGTTAGATCAGACTTCTTGTGTTCACTCAGTTTTCATGTTTGTTTTTGGTAAGAAAATTATATTTATTATATTCTAAGAGAAGTTTGCAGGATCTGTTTTTCAGAATCATTATGTACTATTGAGAATTTGATTTGCAATATCTAATAGTGTTAGAGTGAACCAATAGCATTCACATCCTATTCAGTAAACCGTGCAATTTTGCTTCAATGTTATTGTATTGGATGGCCCTTCGATTGTTGTTCTTCTGATATTTCCAAGATGAAAATTGGAACTGC 1914 0.3422 MLPLNRGVIQISSSPHHQQHKISEDLILEDYVSLDFSDSAKRVGGSQPKKLIHGYHKNKNYGNQYSSESKKKKMIHREIERRRRQQMATLYASLRSLLPIEFIKGKRSISDYMNESVNYIKHLKKNIKELTAKRDELKKLSSSSLENHDSNSSSGSFTIHENDGIIGIEITSGFREESFPLSKLLKLLLEEGLEVVTCLSSVVNGRLLYSVQCEVSNSNSLDLPELRRKVSRVIPLFGSSD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01246 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Bach1g01246 241 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Bach1g01246 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 58 232 - -
Bach1g01246 241 FunFam Transcription factor bHLH126 63 151 - -
Bach1g01246 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 138 IPR036638 GO:0046983
Bach1g01246 241 SMART finulus 77 129 IPR011598 GO:0046983
Bach1g01246 241 Coils Coil 113 140 - -
Bach1g01246 241 Gene3D - 62 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01246 Bach-Chr1 25897871 25900189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01246 72 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 44.828 2.03e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g01246 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01246 - - gmx:100780888 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01246 1 25897871 25900189 Bach1g01246 1 25897871 25900189 ECH