Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01225 ATGGACCTTGATGGGGGCAATAAGCGGGTGTTCCAGAGGCTCAGTGGACCTGCTGCGGCAGATGCCAAGCACCAAAAGGTTTGCTACCATTGGCAAGCAGGAAAGTGCAATAGACATCCTTGCCCGTTTTTGCACAGTGAATTACCGCCTTCAAACGTTAACGGGATGTCTTCGAAACGGCCCCATGGCCATGGGTCGAATGCTGATTCGGGTTTCCCGGGCCCGCGGAGGAGTCCGAATATTAGTGGTGCTTCAACGTGGGGGCGGGCTCATGTTGGGGGAGCTAATAGAATAGTTAGGAAGGCTGAGAAAGTTTGTAACTATTGGGTTCAGGGGAGTTGTAGTTTTGGAGACAGGTGTAAGTTCCTTCACTCTTGGAGTTTAGGTGATGGTTTTTCGTTGATGACACAGCTTGAAGGGCATCAAAAGGTTGTTAGTGGAATCGCCCTGCCATCTGGATCTGATAAGCTCTATACTGGAAGCAAAGATGAGACTGCAAGGATTTGGGACTGCCAGTCTGGAAAGTGTATAGCTATGATCAATCTTGGTGGTGAAGTAGGTTGTATGATCAGTGAAGGTCCTTGGGTTTTTGTTGGCATACCTAATGTTGTTAAGGCATGGAACATTCAAACGTCAATGGAGCTAAGTCTGAGTGGTCCTGTTGGACAAGTATATACTTTGGTTGTGGGTAGTGATATGCTCTTTGCTGGTACGCAGGATGGGTCTATATTGGCATGGAAGTTCAATGTAGTAACCAACTGCTTTGAGCCAGCTGCATTGCTTAAAGGTCATTCCCTTGGTGTTATTTCTTTAGTCGTCGGTGGTAATAGGCTATACTCTGGTTCCATGGACCATACAATAAAAGTGTGGAGCCTTGAAAATTTGCAATGTTTACAGACACTAACAGAGCACACATCCGTTGTGATGTCTGTTCTTTGCTGGGACCAGTTTCTTTTATCTTGTTCGTTGGACAATACAGTAAAGGTTTGGGTTGCTACGGAAAGTGGAAACTTGGAAGTGACATATACTCACAATGAAGAACATGGCGTAATTACCCTCTGTGGGATGCATGATTCTCAGGGCAAGCCTATTTTATTGTGCTCATGCAATGACAATACCGTGCGCCTCTATGATTTGCCATCGTTTACAGAGAGGGGCAAGATTTTCTCCAAACAAGAGGTTCGAGCAATACAAACAGGTCCTGGTGGCATATTCTTCACTGGTGATGGAACAGGCCAAGTGAAAGTGTGGAATTGGTTAACAGAGCCAAGTACTTCCGCCCAGTAAATGTCACGTCCAATTTAACTATTTCAGTAATTTTTCTTAAGTTTTTGGGCTTCCCTTATTTGTAATATTTTCTTTTGCTGAAAGAAGAAATTGGGGTGAGTTTGTGGGAAGAGGAGGGGGGCGTTCTTGTAATTTCAATTTTCGGAAGTAGCCTTACATCTAGAATGAGTTTTGGTTCTA 1467 0.4472 MDLDGGNKRVFQRLSGPAAADAKHQKVCYHWQAGKCNRHPCPFLHSELPPSNVNGMSSKRPHGHGSNADSGFPGPRRSPNISGASTWGRAHVGGANRIVRKAEKVCNYWVQGSCSFGDRCKFLHSWSLGDGFSLMTQLEGHQKVVSGIALPSGSDKLYTGSKDETARIWDCQSGKCIAMINLGGEVGCMISEGPWVFVGIPNVVKAWNIQTSMELSLSGPVGQVYTLVVGSDMLFAGTQDGSILAWKFNVVTNCFEPAALLKGHSLGVISLVVGGNRLYSGSMDHTIKVWSLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDNTVKVWVATESGNLEVTYTHNEEHGVITLCGMHDSQGKPILLCSCNDNTVRLYDLPSFTERGKIFSKQEVRAIQTGPGGIFFTGDGTGQVKVWNWLTEPSTSAQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01225 428 Gene3D - 8 57 - -
Bach1g01225 428 FunFam Zinc finger CCCH domain-containing protein 48 218 426 - -
Bach1g01225 428 Pfam WD domain, G-beta repeat 134 170 IPR001680 GO:0005515
Bach1g01225 428 Pfam WD domain, G-beta repeat 296 330 IPR001680 GO:0005515
Bach1g01225 428 Pfam WD domain, G-beta repeat 261 291 IPR001680 GO:0005515
Bach1g01225 428 SMART c3hfinal6 102 126 IPR000571 GO:0046872
Bach1g01225 428 SMART c3hfinal6 24 47 IPR000571 GO:0046872
Bach1g01225 428 PRINTS G protein beta WD-40 repeat signature 157 171 IPR020472 -
Bach1g01225 428 PRINTS G protein beta WD-40 repeat signature 318 332 IPR020472 -
Bach1g01225 428 PRINTS G protein beta WD-40 repeat signature 278 292 IPR020472 -
Bach1g01225 428 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 170 - -
Bach1g01225 428 SUPERFAMILY WD40 repeat-like 132 421 IPR036322 GO:0005515
Bach1g01225 428 Gene3D - 93 125 - -
Bach1g01225 428 Pfam Zinc finger domain 106 124 - -
Bach1g01225 428 ProSiteProfiles Zinc finger C3H1-type profile. 22 48 IPR000571 GO:0046872
Bach1g01225 428 MobiDBLite consensus disorder prediction 52 86 - -
Bach1g01225 428 FunFam Zinc finger CCCH domain-containing protein 48 126 216 - -
Bach1g01225 428 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 261 294 - -
Bach1g01225 428 Gene3D - 228 428 IPR015943 GO:0005515
Bach1g01225 428 ProSiteProfiles Zinc finger C3H1-type profile. 100 127 IPR000571 GO:0046872
Bach1g01225 428 SUPERFAMILY CCCH zinc finger 101 125 IPR036855 GO:0046872
Bach1g01225 428 PANTHER - 97 427 IPR044715 -
Bach1g01225 428 Gene3D - 126 219 IPR015943 GO:0005515
Bach1g01225 428 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 179 IPR001680 GO:0005515
Bach1g01225 428 ProSiteProfiles Trp-Asp (WD) repeats profile. 261 300 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 131 170 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 335 378 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 210 247 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 381 418 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 294 331 IPR001680 GO:0005515
Bach1g01225 428 SMART WD40_4 254 291 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01225 Bach-Chr1 25579141 25583346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01225 231 421 Miscellaneous Gene Families AT5G08390 27.586 1.10e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach1g01225 WD40 0.0022 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01225 - - qsa:O6P43_008277 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01225 1 25579141 25583346 Bach1g01225 1 25579141 25583346 ECH