Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01223 GCCGCCCATGGCATCTGCAACTCTCTGTCTCCCTCCTCCCACTCGCGTCCATTCTTTCAGGCCAACACTCTCTTTCTCCACTACTTCATCCCTTTTTCACCCATTACGTTCACTCCCTTCATCCCCACTTTCCCTCCGCTCCACATTCCACAGAACTCTGTTAAGGACTAACACAATTCCACTTGCCTATGTAACTGGACCTGCATCGGATTTGAGCGAATCAGACCCGAAGATAGACCGTTCGGATTCTCTGCCAGAAAAGGCCGAGCCGCCGAGTGTGATAAACTGGGGGATTATGTGGAGGCTTCTGATGAAGCACAAGATGAGGCTCGCTCTTTGCACAGTTACTCTTATTTGTTGCACTAGCTGTACGCTATCGATGCCCGTCATTACTGGGGAATTTTTTGAACTCCTTATTGGTGCCAGACCAGAGCCTATGTGGAGGCTGCTTGGTAAGTTCGGAGTGGTGTATACCCTGGAGCCACTTTTAACTATTATCTTTGTTATAAACATGAACTTAGTGTGGGAGAAGATTATGTCAGCACTAAGAGCCCAGATCTTCGGAAGGATATTGATTCAGAAGGTCGAGTTTTTTGACAGATATAAGGTTGGTGAGCTCACTGGTTTGTTGACATCTGATTTGGGTTCTCTTAAAGATATTGTAAGTGAGAATGTTTCCAGGGATCGAGGATTCAGGGCACTATCTGAGGTCATTGGGACTCTATGCATTCTTTTTGTTTTATCCCCTCAACTTGCACCAATCCTAGGTGTTCTGATGCTCACAGTTTCTGTTTTCGTTGCTGTCTACAAGAGATCCACTTTGCCGGTTTTTAAAGCACATGGAATGGTCCAAGCATCTCTATCTGATTGTATAACAGAAACATTTTCGGCCATTCGAACAGTAAGGTCCTTTAGTGGTGAGAAGCGTCAATTATTCACGTTTGCTAACCAGGTTCTTTCTTACCAATCAAGTGGGATAAAGCTTGGAACTTTTAAATCTGTAAATGAAGCCGTTACTAGAGTTGCAGTTTATGTTTCTCTGATGGCACTATATTTGCTTGGAGGAAGCAAAGTTAAGGCGGGTGAACTCTCCTTGGCCACTGTGACATCATTTATTGGATATACTTTCACATTAACATTTGCTGTTCAAGGACTGGTTAATACTTTTGGAGATCTTCGTGGTTCTCTTGCTGCTGTTGAGAGGATAAACTCTGTATTGTCTGGGGTTGAAATTGATGATGCCCTTGCTTATGGCTTAGAAAGAGAACTAAAACAAAAAGAAGTGGATGATGAGAACTATGAATTGTTGTTCTCTATTAATTCTGCCGAGAGACACCAAAGCAGATATTTGCATTACATGTCAGCATTGAAATCATCGAGCAATTTGTTTAGCTTAGCTTGGTCTGGCGATATTTTTCTTGAAGATGTGTATTTTTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAAGCGGCTTAAATCTAAGACTAAAATGTGGAACTGTAACTGCACTGGTGGGTCCTAGTGGTGCAGGCAAAAGTACAATAGTACAGCTATTGTCTCGTTTTTATGAGCCAGCAAGAGGTCGTATCACTGTTGCAGGAGAGGATCTCCGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCCATTGTCAATCAAGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGCCTTCCGGATGAGGATGTTTCTAGAGATGACGTGATTAAGGCAGCGAAAGCTTCAAATGCTCATGACTTCATAATTTCTCTTCCGAAGGGCTATGACACCCTTGTTGGTGAGCGTGGAGGACTACTTAGTGGAGGACAGAGGCAGAGAATTGCTATTGCCCGAGCGATACTGAAGAATGCCCCAATACTTATACTTGATGAGGCCACCAGTGCCTTAGATGCAGTCAGTGAGCGCTTGGTTCAGGATGCTCTTAACCATTTGATGAAGGGGAGGACAACTTTAGTGATAGCTCACCGATTAAGCACAGTTCAAAATGCCCATCAAATTGCACTTTGTTCTGATGGGAGGATTGCAGAACTTGGCACCCACTTTGAGTTATTGGCTAAGAAGGGTCAATATGCTTCATTGGTTGGTTCTCAAAGACTTGCATTTGAATAG 2149 0.4351 MASATLCLPPPTRVHSFRPTLSFSTTSSLFHPLRSLPSSPLSLRSTFHRTLLRTNTIPLAYVTGPASDLSESDPKIDRSDSLPEKAEPPSVINWGIMWRLLMKHKMRLALCTVTLICCTSCTLSMPVITGEFFELLIGARPEPMWRLLGKFGVVYTLEPLLTIIFVINMNLVWEKIMSALRAQIFGRILIQKVEFFDRYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTLCILFVLSPQLAPILGVLMLTVSVFVAVYKRSTLPVFKAHGMVQASLSDCITETFSAIRTVRSFSGEKRQLFTFANQVLSYQSSGIKLGTFKSVNEAVTRVAVYVSLMALYLLGGSKVKAGELSLATVTSFIGYTFTLTFAVQGLVNTFGDLRGSLAAVERINSVLSGVEIDDALAYGLERELKQKEVDDENYELLFSINSAERHQSRYLHYMSALKSSSNLFSLAWSGDIFLEDVYFSYPLRPDVEILSGLNLRLKCGTVTALVGPSGAGKSTIVQLLSRFYEPARGRITVAGEDLRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSRDDVIKAAKASNAHDFIISLPKGYDTLVGERGGLLSGGQRQRIAIARAILKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALCSDGRIAELGTHFELLAKKGQYASLVGSQRLAFE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01223 713 MobiDBLite consensus disorder prediction 65 86 - -
Bach1g01223 713 SUPERFAMILY ABC transporter transmembrane region 97 405 IPR036640 GO:0005524|GO:0016020
Bach1g01223 713 ProSitePatterns ABC transporters family signature. 610 624 IPR017871 GO:0005524|GO:0016887
Bach1g01223 713 SMART AAA_5 496 690 IPR003593 GO:0016887
Bach1g01223 713 Gene3D ABC transporter type 1, transmembrane domain 79 407 IPR036640 GO:0005524|GO:0016020
Bach1g01223 713 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 80 711 IPR039421 -
Bach1g01223 713 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 467 711 - -
Bach1g01223 713 Pfam ABC transporter 487 638 IPR003439 GO:0005524
Bach1g01223 713 Pfam ABC transporter transmembrane region 109 379 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01223 713 Gene3D - 467 710 IPR027417 -
Bach1g01223 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 469 707 IPR003439 GO:0005524
Bach1g01223 713 CDD ABC_6TM_TAP_ABCB8_10_like 111 400 - -
Bach1g01223 713 CDD ABC_MTABC3_MDL1_MDL2 469 708 - -
Bach1g01223 713 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 109 392 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01223 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 708 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01223 Bach-Chr1 25552217 25563815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01223 466 713 Calmodulin-binding Proteins AT2G36910 53.785 9.03e-74 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01223 K05657 - gmx:100791034 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01223 1 25552217 25563815 Bach1g01223 1 25552217 25563815 ECH