Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01218 CTCAGCTGTAGCTCGCCAAGGTAGCGGCGAAAGGAAGATCTGGGATCTGATCTAATTGTTTTCTGGCTTGATCTGTTCTGGGAGGGGAAATGAGGCCAATTTTCTGTGGGAATTTTGAATATGATGCTAGGCAGTCTGAATTGGAGCGGCTTTTTAAAAGATACGGGAAGGTTGAAAGGGTGGATATGAAGTCTGGGTTTGCTTTTATCTATATGGAAGATGAGCGAGATGCTGAGGATGCCATCCGTGCTCTTGATCGGGTGGAATTTGGTCGGAAGGGACGTAGGCTTCGTGTGGAATGGACGAAGCATGAACGTGGCATTAGAAGGCCTGGTGGTTCAAGAAGATCATCAACTAATACGAGGCCATCAAAGACCTTATTTGTGATTAATTTTGATACATACCATACCAGGACAAGGGACTTGGAGAGGCACTTTGAGCCATATGGTAAGATAGCTAGTGTGAGGATCAGAAGGAATTTTGCATTTGTTCAGTATGAATCAGAGGGCGATGCCACAAGAGCCTTGGAAGCTACAAATATGAGCAAGTTAATGGATCGAGTGATTTCTGTTGAATTTGCTGCAAAGGATGATGATGATAGGCGGAATGGATACAGCCCTGATAGAAGTTATGATCGTCCACGCGATAGGAGTCGTGATAGAAGACGATCACCCAGTCCCTATCGTAGAGAAAGGGGTAGCCCTGATTATGGCCATGCTGGTAGTCCATATGGGAGAGACCGGGGTAGCCCTGACTATGGTCAGGGCCGCAGCCGTAGTCCCTCACGGAGAGTTCAAGCTAGCCCTGATTATGGTCGTGGAAGCCGCAGTCCACACAGAAGAGAGAGGGATGGCTCTGATCATGTACATGACTCCAGCCGTAGTCCTTATCATAAAGAGCAGATGAGAACTGACCGTGGCAACTCTCCCTCCCATAGTCCTAATGGAAGAGAGAGGATAAGCCCTCAAAATGACGGTGGTTCCAGTCGTAGTCCTTATGAAATGGAGAGGGCTAGTCCTGAAAATGTTCATGGCTCTAGGCATAGTCCTGATGCAAGAAGGAATCCTAGTCCTTACAATGGTTATGCAGGGAGCCCAAATTCTATGCCTGGGCCCAGGGACAGTCCCAACTACGATGCTCCTGAAAGTCCTATGCATGAAAGATATCGCAGCCAGTCACCCCCTGCAGAAGAATGA 1196 0.4791 MRPIFCGNFEYDARQSELERLFKRYGKVERVDMKSGFAFIYMEDERDAEDAIRALDRVEFGRKGRRLRVEWTKHERGIRRPGGSRRSSTNTRPSKTLFVINFDTYHTRTRDLERHFEPYGKIASVRIRRNFAFVQYESEGDATRALEATNMSKLMDRVISVEFAAKDDDDRRNGYSPDRSYDRPRDRSRDRRRSPSPYRRERGSPDYGHAGSPYGRDRGSPDYGQGRSRSPSRRVQASPDYGRGSRSPHRRERDGSDHVHDSSRSPYHKEQMRTDRGNSPSHSPNGRERISPQNDGGSSRSPYEMERASPENVHGSRHSPDARRNPSPYNGYAGSPNSMPGPRDSPNYDAPESPMHERYRSQSPPAEE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01218 368 FunFam Serine/arginine-rich splicing factor RS31 1 85 - -
Bach1g01218 368 MobiDBLite consensus disorder prediction 244 276 - -
Bach1g01218 368 MobiDBLite consensus disorder prediction 277 300 - -
Bach1g01218 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Bach1g01218 368 SMART rrm1_1 3 70 IPR000504 GO:0003723
Bach1g01218 368 SMART rrm1_1 96 162 IPR000504 GO:0003723
Bach1g01218 368 SUPERFAMILY RNA-binding domain, RBD 2 168 IPR035979 GO:0003676
Bach1g01218 368 MobiDBLite consensus disorder prediction 350 368 - -
Bach1g01218 368 MobiDBLite consensus disorder prediction 168 206 - -
Bach1g01218 368 MobiDBLite consensus disorder prediction 168 368 - -
Bach1g01218 368 CDD RRM1_AtRSp31_like 2 73 - -
Bach1g01218 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 95 166 IPR000504 GO:0003723
Bach1g01218 368 Gene3D - 86 176 IPR012677 -
Bach1g01218 368 Gene3D - 1 85 IPR012677 -
Bach1g01218 368 FunFam Serine/arginine-rich splicing factor RS31 87 177 - -
Bach1g01218 368 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 96 324 - -
Bach1g01218 368 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 62 IPR000504 GO:0003723
Bach1g01218 368 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 97 159 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01218 Bach-Chr1 25491763 25495921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01218 4 161 Eukaryotic Initiation Factors Gene Family AT4G34110 23.121 3.87e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01218 K12893 - gmx:100781534 558.14