Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01202 ATGGAGGGCCACGCTGAGATGGCTCTAATTGGGGAAAATCTTGATCCTAGTTTGGTAGGGAGGATGAGGGATGATGGTTATGAGAGCCGTTCAGGAAGTGATAACTTTGAAGGCGCTTCAGGTGATGATCAGGAAGCTGGTGATGATCAATCGCAGAGGAAGAAGAAATATCATAGGCACACTCCACACCAGATTCAAGAGCTTGAATCGTTCTTCAAGGAGTGTCCTCATCCCGATGAGAAGCAAAGGATGGAACTGAGCAGGAGGCTTGTCTTGGAGGGTAAGCAAGTCAAATTTTGGTTTCAGAATAGGCGAACCCAAATGAAGACTCAACTTGAGCGCCATGAGAACGTAATTCTGAGACAAGAAAATGACAAGCTTAGAGCTGAAAATAGTGTGATGAAGGAAGCCATGGCAAATCCGGTATGTAACGGCTGTGGTGGCCCAGCCATTCCTGGACAAGTTTCATTTGAGGAGCACCAAATGAGGATTGAAAATGCTCGCCTAAAGGATGAACTGAACCGCATATGTGCCCTTGCAAACAAGTTCATAGGCAGGCCAATTTCAACCTTGGCCAGTCCCATGGCTCTTCCGGGCCCAAATGCTGCTTTGGAACTCGCTATTGGAAGGAGTGGACTCTGTAGTTCAAGCCCTCTGCCAATGGGACTTGATTTGGGAGATGGAGGCCTGAGCACTCCACCAGCAATACCTGGGATTAGGTCACCTATGGGATTGATGGAAAGTGAAGTCCAGCTTGAACGATCCATGGTCATTGATCTTGCATTATCTGCTATGGAGGAATTAGTTAAGATGTCTCAGGCAGATAGCCCTCTTTGGATTAAGAGTTTTGATGGGGAGAAGGAGGCTCTGAACCATGGTGAATATGCAAGGATAGCATCTCCTTGTATTGGCCCAAAACCTACTGGTTATGTAACTGAAGCTACGAGAGAAACTGGCATAGTGATCATCAACAGTTTAAACCTTGTGGAAACATTGATGGACGCAAATCGATGGGCGGAGATGTTTCCATCAATGATTACTAGAGCTGCCACCCTTGAAGTTATATCACATGGCATGGCTGGAACTCGAAATGGTGCTTTACATGTGATGCAAGCTGAGGTTCAAATGCTTTCTCCCTTGGTCCCTGTTCGGCAATTGAGATTCATTCGGTTCTGCAAGCAGCATGCTGAAGGTGTATGGGCTGTAGCTGATGTTTCAATTGACAGTGGCCGTGACACTGCCAATGCAAGCCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGTTGTGTTATACAGGATATGCCTAATGGTTACTCTAAGGTTACATGGGTTGAGCATTCACAATGCGATGAGACTATGGTCCACCAACTTTACCGTCCGTTGCTTAGTTCTGGTATTGGCTTTGGCGCTCATAGGTGGATGGCCACTCTCCAAAGACAATGCGAATGCTTAACATTCCTGGTGTCTCCATCTAGTGAGGATCAGATAGCAGGCATGAGCTCAGCTGGTCGGAGAAGCATGCTGAAGCTGGCACAGCGTATGACTGAAAACTTCTGTTCTGGGGTTTGTACTTCGTCTACATGCAAGTGGGACAGCCTTCAAGTTGGGAATTTGGGTGATGACATCAAAGTTATGACCCGAAAGAACGTGGATGTCCCTGGTGAGCCTCCTGGTATTGTGCTCAGTGCTGCAACTTCCGTTTGGATGCCAATTTCAAGACACAAGCTGTTTAACTTCCTGCGAGATGAGCGAATGCGAAGCGAGTGGGATATTCTGTCCACTGGTGGACTAATGCAAGAGATGGTCCACATTGCCAAGGGACAGGCACATGGAAATTGTGTTTCTCTACTTCGTGCAAGTGCAGTGAATGCCAACGAGACGACAATGCTGATTCTGCAAGAGACATGGACAGACAGCTCGAGCTCAATGGTAGTCTATGCACCGGTGGACGTCCAATCCTTAAACGTTGTCATGAGTGGTGGAGATTCCATGTATGTTGCTCTGTTGCCTTCAGGATTTGTCATTCTTCCGGATGGCCAACCCAGCTCCGGCTACAGCGGCGCACTAAACAATTGCAACGGGACTCTAATGAAGAGCGACGATGATGGTGGCGGGGATAGTGGTGGATGCCTACTCACTGTTGGGTTCCAAATTCTGGTGAATAGCTTGCCATCTGCAAAACTCACCGTTGAGTCAGTTGAAACAGTGAACAACCTCATCTCATGCACTATCCAGAAAATCAAGGCTGCTCTTAGGATTCCTTGA 2265 0.4751 MEGHAEMALIGENLDPSLVGRMRDDGYESRSGSDNFEGASGDDQEAGDDQSQRKKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLVLEGKQVKFWFQNRRTQMKTQLERHENVILRQENDKLRAENSVMKEAMANPVCNGCGGPAIPGQVSFEEHQMRIENARLKDELNRICALANKFIGRPISTLASPMALPGPNAALELAIGRSGLCSSSPLPMGLDLGDGGLSTPPAIPGIRSPMGLMESEVQLERSMVIDLALSAMEELVKMSQADSPLWIKSFDGEKEALNHGEYARIASPCIGPKPTGYVTEATRETGIVIINSLNLVETLMDANRWAEMFPSMITRAATLEVISHGMAGTRNGALHVMQAEVQMLSPLVPVRQLRFIRFCKQHAEGVWAVADVSIDSGRDTANASPFMSCRRLPSGCVIQDMPNGYSKVTWVEHSQCDETMVHQLYRPLLSSGIGFGAHRWMATLQRQCECLTFLVSPSSEDQIAGMSSAGRRSMLKLAQRMTENFCSGVCTSSTCKWDSLQVGNLGDDIKVMTRKNVDVPGEPPGIVLSAATSVWMPISRHKLFNFLRDERMRSEWDILSTGGLMQEMVHIAKGQAHGNCVSLLRASAVNANETTMLILQETWTDSSSSMVVYAPVDVQSLNVVMSGGDSMYVALLPSGFVILPDGQPSSGYSGALNNCNGTLMKSDDDGGGDSGGCLLTVGFQILVNSLPSAKLTVESVETVNNLISCTIQKIKAALRIP 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01202 754 SMART HOX_1 53 115 IPR001356 GO:0003677
Bach1g01202 754 CDD homeodomain 54 111 IPR001356 GO:0003677
Bach1g01202 754 Pfam START domain 260 483 IPR002913 GO:0008289
Bach1g01202 754 Coils Coil 105 140 - -
Bach1g01202 754 ProSiteProfiles START domain profile. 250 486 IPR002913 GO:0008289
Bach1g01202 754 Gene3D - 40 126 - -
Bach1g01202 754 SUPERFAMILY Bet v1-like 252 483 - -
Bach1g01202 754 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Bach1g01202 754 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Bach1g01202 754 SUPERFAMILY Homeodomain-like 40 111 IPR009057 -
Bach1g01202 754 SUPERFAMILY Bet v1-like 510 748 - -
Bach1g01202 754 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 751 IPR042160 -
Bach1g01202 754 CDD START_ArGLABRA2_like 254 482 - -
Bach1g01202 754 FunFam Homeobox-leucine zipper protein HDG1 40 127 - -
Bach1g01202 754 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Bach1g01202 754 SMART START_1 259 483 IPR002913 GO:0008289
Bach1g01202 754 FunFam Homeobox-leucine zipper protein GLABRA 2 259 482 - -
Bach1g01202 754 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01202 Bach-Chr1 25291050 25295602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01202 1 751 Homeobox Transcription Factor Family AT3G61150 58.607 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach1g01202 START 6.2e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01202 K09338 - gmx:100794400 1199.11