Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01199 ATGGCTCCGCCGCCTCCGGTGGAAAGCAACGGCGAGTCCACCTCTGGTGATTCTCAGAGATCCATCCCGACGCCGTTTCTTATTAAAACTTATCAGCTCGTTGACGATCAAGCAATAGATGATGTCATATCTTGGAACGAAGATGGATCCAGCTTCATCGTCTGGAACCCGACGGTTTTTGCTAGAGATTTGCTTCCTAAATATTTTAAGCACAACAATTTCTCTAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGAAAAGTTGTACCTGATCGATGGGAATTCTCGAACGACTGTTTTCGTAGAGGTGAGAAAAGGCTTCTATGTGAGATTCAGCGTCGGAAAATTAATTCAACCTCAGCAGGGACTGCGGCACCCGCTACCGTGGCTGTTCCGGGACCGGTGACGTTGACTGAGATACCAACAGCGAAGCTTATCATATCACCCTCAAACTCCGGAGACGAGCAGGTGATTTCGCCAAATTCATCGCAGACTATAGCTCCGGCGGATCTATTAGACGAGAACGAGAGGTTGAGAAAAGAGAATGTTCAGTTGACGAAAGAATTAGCAGAGATGAGGTCTCTATGTAACAATATATTTACTCTGATGTCTAACTATGCCAACAACCAAACGGAGACTGTTGCGCAAGGTAGAGACAACAGTTTCACGGCAGTGAAACCTCTCGATTTGATGCCAGCGAAGCGGAACTCCAGCGAGGAGGCGGAAGCGGCGATTCCGACGGCGGTGGATGAGAAGAATCCGAAGCTATTCGGGGTGGCGATTGGCGGGAAGCGAGCGAGAGAGGGTGGAGGACGAGGAGCTGATGATGAGACAGTATTGAGCCTGTATCAGCCGGGGCCTGCGGAGGTAAAATCAGAGCCGTTGGATTGCGAGAACCGTCATGATAATCAGGAAACACCGTGGCTTAATCACTGCCATATGGCTAATCAGAAAGTGTGTAATTGA 969 0.4881 MAPPPPVESNGESTSGDSQRSIPTPFLIKTYQLVDDQAIDDVISWNEDGSSFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKINSTSAGTAAPATVAVPGPVTLTEIPTAKLIISPSNSGDEQVISPNSSQTIAPADLLDENERLRKENVQLTKELAEMRSLCNNIFTLMSNYANNQTETVAQGRDNSFTAVKPLDLMPAKRNSSEEAEAAIPTAVDEKNPKLFGVAIGGKRAREGGGRGADDETVLSLYQPGPAEVKSEPLDCENRHDNQETPWLNHCHMANQKVCN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01199 322 Coils Coil 176 196 - -
Bach1g01199 322 MobiDBLite consensus disorder prediction 1 22 - -
Bach1g01199 322 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Bach1g01199 322 Gene3D - 18 116 IPR036388 -
Bach1g01199 322 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01199 322 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01199 322 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01199 322 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01199 322 MobiDBLite consensus disorder prediction 8 22 - -
Bach1g01199 322 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g01199 322 FunFam Heat stress transcription factor B-4 18 116 - -
Bach1g01199 322 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 228 IPR027725 -
Bach1g01199 322 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01199 Bach-Chr1 25246275 25247345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01199 5 322 HSF AT5G62020 48.968 4.74e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach1g01199 HSF_DNA-bind 2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01199 K09419 - gmx:100812267 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01199 1 25246275 25247345 Bach1g01199 1 25246275 25247345 ECH