Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01194 TTTCTCTTTTCCTTTTCTTTTTCTTGTTCTATTCTATTCTTGCACACCAAGTCAAGAAAGAAACGTTTCTCAACACAACAGAAGCGAACGAAAATTCCATTTTGCTTTCTATTAATATTATTAGTATTTATTGATCCCTCTGCCTTCAAACCTCTGCTTCTCATCTCACACTCGCACAGAGACCAGAGCCACCCCTTGGTCATGGAACCCAAGCGATTCCATTATTTTACCCTTCTCACTTGGTGGACATGGTTTCACCTTGTTCTCTTCCATTGTGGCGCTGATGCTCAGTCAGCTATACAACCAGCACCTTCCTTTGCTTCTCACCATGGGTGGGACCCATCATTTGCTCTCATGGTTGCGGCCCTCACTTGCGCCCTGCTATTCATGGCTTTCTTTTCAGTTTACCTCCGCCACTGCTCCGAGTCCTACAACGCCGCAAGCAATCCAAATGGCGCCGGCACAGATTGGCCCTGTCCCTGCTCCGAGGGAATTAAACCGGAGCAACTGAAAACGTTTCCGGTTCTTGTCTACTCCGCCATCAAAGACCTCAAAATTGGGAAAGGAGTGCTTGAATGTGCAGTGTGTTTGGGTGAGTTCAAAGACCAGGACACTCTCCGGTTGCTGCCTAAATGCAGCCATGTGTTCCATTCTGACTGCATAGACGCCTGGTTAGCCTCCCATGCTACTTGCCCTGTCTGTCGCTCCAAGCTGAGCCCAGATACTGGGGAAGTAGCTATTGCAGTGCCCACCCAGTTGAACGCTGACCGATTGGATGATGAAAATTCTGTTAGAATTGAAGTGGGTGAAATAGAGCAACACCAACACCCAGTGGAGTGTAACGTGAATAGCGATCAGAACAGAGCCGATGAAGCTAATGGGAAGCCCAAGTCGAGTCTGTTGGGGAAGCTCGTGAGGTCGAATTCAACGGGTCACTCTTTGGTTGAACCAGGGAAGAATTTGGACAGGTATACGCTGAGGTTGCCGGAGGAGGTGAGGAAGCATATTCTGGTTGATGATCGGCGTTGTGCAAGCTATCATCTTGTCTTTCCCAGAGAAGGAAGTTACAAGAATTCGAAGGGGTACTGTTGGAGTGATAGTGAAGGGAGTAGCAGAGGTGGTAAGAGAGACAGAGACAGCAATAGTAGTGAACGCCAAGGTGGGCGGTTGGACCGGTGGATTCTGTTAAGGACTCCGCCATTTGGAGAGAGGAACATTCATTGAATGGAACCCAAGCGATTCCATTATTTTACCCTTCTCACTTGGTGGACATGGTTTCACCTTGTTCTCTTCCATTGTGGCGCTGATGCTCAGTCAGCTATACAACCAGCACCTTCCTTTGCTTCTCACCATGGGTGGGACCCATCATTTGCTCTCATGGTTGCGGCCCTCACTTGCGCCCTGCTATTCATGGCTTTCTTTTCAGTTTACCTCCGCCACTGCTCCGAGTCCTACAACGCCGCAAGCAATCCAAATGGCGCCGGCACAGATTGGCCCTGTCCCTGCTCCGAGGGAATTAAACCGGAGCAACTGAAAACGTTTCCGGTTCTTGTCTACTCCGCCATCAAAGACCTCAAAATTGGGAAAGGAGTGCTTGAATGTGCAGTGTGTTTGGGTGAGTTCAAAGACCAGGACACTCTCCGGTTGCTGCCTAAATGCAGCCATGTGTTCCATTCTGACTGCATAGACGCCTGGTTAGCCTCCCATGCTACTTGCCCTGTCTGTCGCTCCAAGCTGAGCCCAGATACTGGGGAAGTAGCTATTGCAGTGCCCACCCAGTTGAACGCTGACCGATTGGATGATGAAAATTCTGTTAGAATTGAAGTGGGTGAAATAGAGCAACACCAACACCCAGTGGAGTGTAACGTGAATAGCGATCAGAACAGAGCCGATGAAGCTAATGGGAAGCCCAAGTCGAGTCTGTTGGGGAAGCTCGTGAGGTCGAATTCAACGGGTCACTCTTTGGTTGAACCAGGGAAGAATTTGGACAGGTATACGCTGAGGTTGCCGGAGGAGGTGAGGAAGCATATTCTGGTTGATGATCGGCGTTGTGCAAGCTATCATCTTGTCTTTCCCAGAGAAGGAAGTTACAAGAATTCGAAGGGGTACTGTTGGAGTGATAGTGAAGGGAGTAGCAGAGGTGGTAAGAGAGACAGAGACAGCAATAGTAGTGAACGCCAAGGTGGGCGGTTGGACCGGTGGATTCTGTTAAGGACTCCGCCATTTGGAGAGAGGAACATTCATTGAGGTGCAGATGTGGAGCTGCAAACCTCACACGAAGGACCCAAGTGTCCTCCACGACAACCACCTCCAATCAAACTGGAATGATTCACAGCGGAAGACTGAGGAAGACGGTAACTTGTCAGCATACGACAACCGAGTCACCTCGTTTTGCTGCCTCAGTTTTTTGTTTTTTTGTTCTGTGTTTTTCTGCGTAATTGGGTTGGGAGTCGGGAACACTGTGCAGGTTAGAATATCATAGGTAGTTATGCTGCACAGTGCACAGCAGTACATACAATTCTTTATTGAGTTCATATTTTTGTTACCAATGCTTTACTAAGCTCTGTGCATACAAGTTTTGTATGTAACAAATATGTCATCCTGGTTTTGTCTTTTATCGGTTAAAGTGTGTATTTACGTCATGGATCCAACGTTTCTCTTCCTTTCTGTTG 2672 0.482 MEPKRFHYFTLLTWWTWFHLVLFHCGADAQSAIQPAPSFASHHGWDPSFALMVAALTCALLFMAFFSVYLRHCSESYNAASNPNGAGTDWPCPCSEGIKPEQLKTFPVLVYSAIKDLKIGKGVLECAVCLGEFKDQDTLRLLPKCSHVFHSDCIDAWLASHATCPVCRSKLSPDTGEVAIAVPTQLNADRLDDENSVRIEVGEIEQHQHPVECNVNSDQNRADEANGKPKSSLLGKLVRSNSTGHSLVEPGKNLDRYTLRLPEEVRKHILVDDRRCASYHLVFPREGSYKNSKGYCWSDSEGSSRGGKRDRDSNSSERQGGRLDRWILLRTPPFGERNIH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01194 340 FunFam E3 ubiquitin-protein ligase ATL6 92 174 - -
Bach1g01194 340 SUPERFAMILY RING/U-box 125 177 - -
Bach1g01194 340 SMART ring_2 126 167 IPR001841 -
Bach1g01194 340 MobiDBLite consensus disorder prediction 216 235 - -
Bach1g01194 340 MobiDBLite consensus disorder prediction 294 319 - -
Bach1g01194 340 MobiDBLite consensus disorder prediction 303 319 - -
Bach1g01194 340 CDD RING-H2_EL5-like 125 168 - -
Bach1g01194 340 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Bach1g01194 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 41 286 - -
Bach1g01194 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 176 IPR013083 -
Bach1g01194 340 Pfam Ring finger domain 125 168 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01194 Bach-Chr1 25193639 25195287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01194 20 334 Rapid Response to Elicitors AT3G05200 36.810 5.30e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01194 K10664 - fve:101295180 256.144