Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01190 ATGGGTGTGAAGCATTTCTGGGATATCCTAGAATCCTGCAAGAAAACCGTTCCACTTCACCATCTCCAGAACAAGAGGCTGTGCATAGATCTCTCATGTTGGATGGTGCAACTCCAGAATGTGAGCAAATCACACTCTTGTCTGAAGGAGAAAGTCTATCTCAGAGGTCTCTTTCACCGCATTAGAGCACTCATTGCTTTGAATTGCAGCCTAATTTTTGTTACAGATGGATCAATTCCTGCTATTAAATTGTCTACTTATAGGCGTCGCTTAAACTCTGGAAAAGAGGTAGCACAAAATGAAAGCAACTTACAGAATATGTCCTCATTACGGAGAAACATGGGATCTGAGTTTTCTTGCATGATAAAAGAGGCTAAAGCCTTGGGTTTGGCTCTTGGCATCCCCTGTTTGAATGGGATTGAGGAAGCAGAAGCACAGTGTGCTTTGTTGAACTATGAACTTTTATGTGATGGGTGTTTTAGTTCAGATTCAGATATCTTCCTTTTTGGTGCAAGGACAGTGTATAGGGATATCTGCCTTGGGGATGGCGGTTATGTTGTTTGTTATGAGGTGGCTGACATTGAAAGACAACTTGGATTTGGAAGGAATTCATTGATTGCTCTTGCCTTACTTCTTGGCAGTGACTATTATCAAGGAGTATATGGTCTGGGTCCTGAGTCTGCTTGTCAAATAGTTAAATCAATTGGGGACAAAGTTGTGCTTCAGAAAATGACTTCTGAAGGACTTCACTTTGTGAAGAAAATGAAAGGTGGAAAGAAACTGGGGCAAGTTTTGAAGAGCAACGACAAAGAAAATATACTGGACCACAATATGAAATTGAAAGATGGAGGGGAGAATCATTCACGAAGGAATGAGGACTTCTTGCAAGTAATCAATGCTTATATGAAGCCAAAATGTCACCTGGCTGATTCTGATACTGTGCAGAGGGCACTTGCTCATTATCCGTTTCAACGTGGTAAACTTCAGCAGACATGTGCTGAGTTCTTTCAATGGCCTCTGGAGAAAACAGATGAGTATATTCTTCCAAAGATTGCTGAAAGAGATTTACGGCGATTTGCCAATTTGCGTTTAACTTCATCAGAACTGGGAGTGAAGCTTCCCTTACATGAGATCCCTGTCAAGTGTCCAGTGTCAGAAATTATCAAGTGCCGGAAGGTTCAAGGTAGAGAATACTATGAAGTTTCCTGGAAAGAAATGCATGGACTTAAAACTTCAATAGTACCTGCAAATCTTTTAGAAAGTGCCTGTCCTGAGAAGATTTCCGAGTTTGATGAGAGAAAAGCTCAAGGGAAGAAACAAAATATTCAGAAAAGAAGACCAAAGGAAGTTGAAACTGCATCTTCTGTTGCTGAACTTGATCTGAAACTCAATAATCTGTTGCTGGATATCAATCTGCAAGACCGTGCTGCTCACAATGCCTCTGGTTCAATAGGACCGATATTAAGAGCTACAACGCCTATGGCTGAAGCTGATCTGAATAGCCAAGACTTACTGCATGAATTGCATGAGGTAGAACTAGTGCCACGGAACCAGAGTAACAGCAACATATCAAGCAATGAGGCTGATTCTGGGACAGCTAAAAGGGAGGTCATAGATCTTCTCAGCCCTTCCCCAATCAAACAATCCCATACTTCCTCCAAATGTCAACAATTGAGAGATCAACATATTGAAGTGATAAATTTGAGTGACTCAGAAGATGAGATGCGATCTGATTCTGAACATGAGAGCAAAGCACAGGAGTTGAGGTTATTCCTAGCAAGTATTCGAAATGACCACTATTAA 1803 0.4115 MGVKHFWDILESCKKTVPLHHLQNKRLCIDLSCWMVQLQNVSKSHSCLKEKVYLRGLFHRIRALIALNCSLIFVTDGSIPAIKLSTYRRRLNSGKEVAQNESNLQNMSSLRRNMGSEFSCMIKEAKALGLALGIPCLNGIEEAEAQCALLNYELLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEVADIERQLGFGRNSLIALALLLGSDYYQGVYGLGPESACQIVKSIGDKVVLQKMTSEGLHFVKKMKGGKKLGQVLKSNDKENILDHNMKLKDGGENHSRRNEDFLQVINAYMKPKCHLADSDTVQRALAHYPFQRGKLQQTCAEFFQWPLEKTDEYILPKIAERDLRRFANLRLTSSELGVKLPLHEIPVKCPVSEIIKCRKVQGREYYEVSWKEMHGLKTSIVPANLLESACPEKISEFDERKAQGKKQNIQKRRPKEVETASSVAELDLKLNNLLLDINLQDRAAHNASGSIGPILRATTPMAEADLNSQDLLHELHEVELVPRNQSNSNISSNEADSGTAKREVIDLLSPSPIKQSHTSSKCQQLRDQHIEVINLSDSEDEMRSDSEHESKAQELRLFLASIRNDHY 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01190 600 SMART xpgineu 130 200 IPR006086 GO:0004518
Bach1g01190 600 FunFam flap endonuclease GEN-like 2 2 199 - -
Bach1g01190 600 Gene3D - 2 199 - -
Bach1g01190 600 SUPERFAMILY PIN domain-like 2 215 IPR029060 -
Bach1g01190 600 Gene3D - 381 448 - -
Bach1g01190 600 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 568 IPR006084 -
Bach1g01190 600 Pfam XPG N-terminal domain 1 92 IPR006085 GO:0004518
Bach1g01190 600 CDD H3TH_XPG-like 203 237 - -
Bach1g01190 600 FunFam Flap endonuclease GEN-like 1 200 258 - -
Bach1g01190 600 SUPERFAMILY Chromo domain-like 383 436 IPR016197 -
Bach1g01190 600 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 200 362 IPR036279 -
Bach1g01190 600 SMART xpgn3 1 97 IPR006085 GO:0004518
Bach1g01190 600 CDD PIN_GEN1 2 198 - -
Bach1g01190 600 Gene3D - 201 273 - -
Bach1g01190 600 Pfam XPG I-region 133 215 IPR006086 GO:0004518
Bach1g01190 600 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Bach1g01190 600 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 205 220 IPR006084 -
Bach1g01190 600 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Bach1g01190 600 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 129 146 IPR006084 -
Bach1g01190 600 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 150 170 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01190 Bach-Chr1 25152827 25164537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01190 1 247 Core DNA Replication Machinery Family AT5G26680 23.704 6.34e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01190 K15338 - gmx:100806919 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01190 1 25152827 25164537 Bach1g01190 1 25152827 25164537 ECH