Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01186 ATGGGGTACAAGGCAGTGGATAGGGCAAAGCCAAAGCACAGGAAGGGTCTATGGTCCCCTGAAGAGGACAATAAGCTTAGAAACTACATCCTTATGCATGGTCATGGTTGCTGGAGTTCTGTTCCCATTAAGGCAGGATTGCAGAGGAATGGAAAGAGCTGCAGACTAAGGTGGATAAATTATCTAAGGCCAGGATTAAAGAGAGGGATTTTCAGCAAAGAAGAGGAAGATACAATTCTGACCCTTCACCACACGTTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTGCCAGGGAGAACTGACAATGAGATTAAAAACTATTGGCACTCATATTTGAAAAAGAAAGTTGCCAAAGCTCAGGAAATTGAAGCTCTCAAACAAACTCAGTATACTAGCTCAAGTTCAGATACAATGAATTCTTCACACTTTTCTCAGAAACAGGAAACTCAAATTCCAGACAATGATCACTCATCTCAGCAGAATTACAACTTCAACAAACAGGCCTATCCAAGCTCCTTACCCAAGCTGTTATTTGCTGAGTGGCTTTCTTTGGATTATGTGCATGGTGACAGCTCTACAAATTCAGATGACCCTTTGGCCTTGTATGATCACTCATCTCAGCAGAATTACAACTTCAACAAACAGGCCTATCCAACCTTGAAGGATGGATTTGATCAAAACTCAAATTTCCAGGAAGCTGGAATGTATGGTTTATCAGAAGGAAGCTATGGAGCCACTCTTACTGAGACTTCAGCAACTGAGATGTTCAATTCACAGCTCAAGTTTTCAACTCAAATGGAAAATGGGTTCATCCATTGTGTCCCTGGGGTTAATTTAGGTGGCAGCTTCGGCATGAACAATAATGATGTAATGTACATATGA 885 0.4158 MGYKAVDRAKPKHRKGLWSPEEDNKLRNYILMHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGIFSKEEEDTILTLHHTLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKVAKAQEIEALKQTQYTSSSSDTMNSSHFSQKQETQIPDNDHSSQQNYNFNKQAYPSSLPKLLFAEWLSLDYVHGDSSTNSDDPLALYDHSSQQNYNFNKQAYPTLKDGFDQNSNFQEAGMYGLSEGSYGATLTETSATEMFNSQLKFSTQMENGFIHCVPGVNLGGSFGMNNNDVMYI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01186 294 Gene3D - 15 67 - -
Bach1g01186 294 FunFam MYB transcription factor 70 141 - -
Bach1g01186 294 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bach1g01186 294 MobiDBLite consensus disorder prediction 130 166 - -
Bach1g01186 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach1g01186 294 CDD SANT 71 113 IPR001005 -
Bach1g01186 294 CDD SANT 18 62 IPR001005 -
Bach1g01186 294 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach1g01186 294 Gene3D - 70 117 - -
Bach1g01186 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bach1g01186 294 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bach1g01186 294 SMART sant 67 115 IPR001005 -
Bach1g01186 294 SMART sant 14 64 IPR001005 -
Bach1g01186 294 FunFam MYB transcription factor 12 68 - -
Bach1g01186 294 PANTHER MYB DOMAIN PROTEIN 55 8 231 - -
Bach1g01186 294 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bach1g01186 294 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01186 Bach-Chr1 25094584 25096366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01186 4 223 MYB Transcription Factor Family AT5G52260 50.000 8.17e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g01186 Myb_DNA-binding 5.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01186 K09422 - gmx:778167 372.859