LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g01153	CGCGATCTCTCTCCGTCTTTCAATTCAGAAATTCGCTATATGCCACAGCAAATCCTTTTCCAGTTACTTGCATTTTGGATATTCTGGTTCTTGGTTGGTCTCTTTCGCGGACTTCTGAACTATTCAAGAAATTCTTTACTCAGATTTGAGCTAAAATCATGCAGTGGGTTCACTTCAGATTCATAGCGTTGATTATTTAAAGTTTTGTGGTTTCATGTTTAATCACTAATTTCTCCCTTAGCATTAGAGGTGCAGCATTTAATATTCCTGAAGCCCTTATTTGGTAAAGTTTATGGCTGGATCATAACATTTATAAGTACATCTACTGATATGGAACAATAAAGTTTTCAAACTACTAATGGAATTCTTTTAAGAAATTTGCTTGTCAAACCTCTATATATACAATTCAAATATGCCTTCATGGTGGGGGAAATCGTCATCAAAAGAACCCAAGAAGAAACCAAGTAAAGAAGGTTTTATTGATTCATTACACCGAAAATTTAAGATCTCATCTGAAGGTAAAGGCAATAGATCTGGAGGATCTCAAAGACATTGCAGTGATACAGTTTCTGAGAAAGGGGCTCAGTCTCCTGCTGAATCAAGATCTCCTTCACCCTCTAAAGTTTCAAGGTGCCAAAGTTTTGCTGAAAGACCCAATGCTCAGCCTCTACCACTTCCCAGTTTGAACCCTTCCAGTGTAGGACGAACGGAGTCTGAAATTAGTATATCATCAAAGTCAAGACTGGAGAAGGGTTCCAAGCCATCATTGTTTCTACCTCTTCCAAGGCCTGCATGCATACGTAACAGGTTGAACCCACAAGATTTGGATGGGGATCTGGTTACTGCTTCAATCTCTAGTGAGAGCTCTGCTGTTAGTGATGAGCCAGCAGACTCGCGTAATCGTAGTCCTCTGGCAACTGACTATGAGAATGGGACTAGAACTGCTGCAGGAAGCCCTTCCAGTTTGGTACCAAAGGATCAAATAACTAGTGTTTCCCAACAAAATTTGAGAGATGCCAAAAAGCCTGCCAACATTCTCAGTAATCATATATCTCCCACATCACCAAAGGGGAGACATTTAAGCAACCATGTGCCAAATCTACTGGTTCCCCATCATGGTGCCTCCTGTAGTGCTCCTGACAGCTACATGTCAAGTCCTTCAAGAAGTCCAATGAGAGCATTTGGCACAGAACAAGTGGTGAACTGTGCTTTTTGGTCTGGAAAGCCATATTCAGAGGTCACTTTGATTCGATCTGGTCACTGCTCAAGTCCAGGTTCTGGTCACAATTCCGGGCATAATTCAATGGGAGGTGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGAAGCCCTGAGTATTCTCCTGTCCCTAGTCCCAGAATGACAAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGGGCTGTCACACCAACTCATCCTAGAGCTGGGGGTACTCCAGCTGATTCACAGTCAGGACGGGTAGATGAGGGAAAACAACAGAGTCATCGTCTGCCCCTTCCTCCTTTAATGGTTACCAATCCATCACCTTTCTCTCAATCAAATTCAGCAGCAACATCTCCATCGATGCCAAGAAGTCCTGGAAGAGCAGATAATCCAACCAGTCCTGGATCACGTTGGAAAAAGGGAAAGCTTCTGGGCAGGGGCACATTTGGACATGTATATGTTGGTTTCAATAGTGGAAGTGGTGAAATGTGTGCAATGAAGGAGGTCACTCTGTTTTCGGATGATGCCAAGTCCAAGGAAAGTGTGAAGCAATTAATGCAGGAAATTACTCTATTAAGCAGATTAAGGCATCCAAACATTGTGCAGTATTATGGTTCTGAAACAGTAGGTGATAGGCTTTACATATACCTAGAATATGTATCTGGAGGCTCCATACATAAACTTCTTCAACAATATGGTCCATTTGGTGAACTGGCAATCCGCAGTTATACTCAACAAATTTTGGCGGGGCTTGCTTATCTACATGCTAAGAATACTGTTCACAGGGATATCAAAGGAGCGAACATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACATCAGCTCCATTATCATTCAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTTATAAGGAATTCTAATGGTTGCAACCTGGCTGTGGATATCTGGAGTCTTGGATGCACAGTTTTTGAAATGGCTACGACTAAGCCTCCTTGGAGTCAGTTTGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAGCAATCCCAGATCAGCTCTCAAATGAGGGAAAGGATTTTATTAGGAAATGCTTACAACGTAATCCAAATGATCGTCCTTCAGCTTGTGAACTATTGGATCATCCTTTTGTAAAATGTGCTACACCATTGGAAAGACCTATTCAGGGTCCGGAAGCTTTAGATCTGGTCCCTGGGATTGCACAAGGAGTGAAAGCTTTGGGCATTGGACAAGGAAGAAACCGTTCTACCTTGGATTCTGACAGACTTTCTATTCATTCTTCTAGGGTTTTGAAAACTAATCCTCATGCCAGTGAAATCTATATTCCGAGGAATATATCTTGCCCAGTCTCTCCCATTGGAAGTCCGCTTTTGCAGTCAAGGTCACCACCGCACATGAATGGAAGAATGTCTCCCTCTCCTATATCCAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCACTGGTGGTAGTGGTGCCATTCCATTTAGTAATAATCTAAAACAGTCAGTTTACTTTCAAGAAGGTCTTGGAAGCTTGCCAAAGCCCTCAAACAGCGTCTACATTAATAGCCCTGCAGCTCCTGTCCATCATGACTCAAATGTTGACATATTCCGAGGAATGCAAATGGGGTCTCACATTACTTCGGAACTGGTGTGTGAAAATGATGTTACGGGGAAGCAGGTTGTAAGGCCTGCTCACACCGAGTCCTATGATGTTCAGTCAGTCTTGGCTGATCGGGTTCGCCGGCAGCTGCTGGGGGAACATGTTAAGATTAACCAATCTTTGGATCTAAGTCCTAATTCATCCTTATTGAGCAGAGCAAATGGTATATGACATCTGGCATTTTCCTTGGCACACATATCAGAGAAAGTCCTGAAGTTTGTCAGGATACCATTTTGGTTAAAGAGCCAAAGCATAAGAAAATCAAAGTAATAAATTTGGATCTGGGAATAGACAAGCTTGGGGCACAGAAGTTCTTTTTCCATGACTTCACATTCAAGCTTGTATAGTTCGGATCCTTGCAAGTTGAGCAAACTAAGCCAGAGCATGAAACTTTTTGATGTTCAATTCATTTATACCTACTTGTTCAAATGCTCATCTGTTGGCAAAGAAGCTTGCATTTGTATGTAACATATTTAAGATGCAGCATCAATCCATGAAAAGTTGAGAGCTTGGAATTTTGTCCAATGGTTGACAATATGTGATGACTTACCAAGTTTAATGTTGATATTGGATCAAGGGACGTGAGTTTTGCCAATCATATGTACGGAGTTCCTTACAATTGAAGAATTCATGCATTGAGAGCTGCATGTCTTTGACAATGTCATACAGATGCAGAGAGGATGGAATCGGTACAAGGTTTAGCTTTTGGACTATTTTTTGGGAGGTCAAATATTGCTGTACAGTACGGAATATGGGAGACTGTATTGTGATTCTGAATTTTGTTGATGGAAAGTCAAGAAGTCTTAAGCTGAATTATGTACATTATTGTTTAAAGTAAAAGTGAAGAGATCTAATCTTATGACCA	3803	0.4212	MPSWWGKSSSKEPKKKPSKEGFIDSLHRKFKISSEGKGNRSGGSQRHCSDTVSEKGAQSPAESRSPSPSKVSRCQSFAERPNAQPLPLPSLNPSSVGRTESEISISSKSRLEKGSKPSLFLPLPRPACIRNRLNPQDLDGDLVTASISSESSAVSDEPADSRNRSPLATDYENGTRTAAGSPSSLVPKDQITSVSQQNLRDAKKPANILSNHISPTSPKGRHLSNHVPNLLVPHHGASCSAPDSYMSSPSRSPMRAFGTEQVVNCAFWSGKPYSEVTLIRSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPTHPRAGGTPADSQSGRVDEGKQQSHRLPLPPLMVTNPSPFSQSNSAATSPSMPRSPGRADNPTSPGSRWKKGKLLGRGTFGHVYVGFNSGSGEMCAMKEVTLFSDDAKSKESVKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIHKLLQQYGPFGELAIRSYTQQILAGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHITSAPLSFKGSPYWMAPEVIRNSNGCNLAVDIWSLGCTVFEMATTKPPWSQFEGVAAMFKIGNSKELPAIPDQLSNEGKDFIRKCLQRNPNDRPSACELLDHPFVKCATPLERPIQGPEALDLVPGIAQGVKALGIGQGRNRSTLDSDRLSIHSSRVLKTNPHASEIYIPRNISCPVSPIGSPLLQSRSPPHMNGRMSPSPISSPRTASGASTPLTGGSGAIPFSNNLKQSVYFQEGLGSLPKPSNSVYINSPAAPVHHDSNVDIFRGMQMGSHITSELVCENDVTGKQVVRPAHTESYDVQSVLADRVRRQLLGEHVKINQSLDLSPNSSLLSRANGI	898

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	284	312	-	-
	Bach1g01153	898	ProSiteProfiles	Protein kinase domain profile.	410	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01153	898	CDD	STKc_MEKK1_plant	409	664	-	-
	Bach1g01153	898	FunFam	Mitogen-activated protein kinase kinase kinase	408	688	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	141	159	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	9	35	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	37	79	-	-
	Bach1g01153	898	ProSitePatterns	Protein kinases ATP-binding region signature.	416	439	IPR017441	GO:0005524
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	377	403	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	89	113	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	739	777	-	-
	Bach1g01153	898	Pfam	Protein kinase domain	411	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g01153	898	SUPERFAMILY	Protein kinase-like (PK-like)	408	751	IPR011009	-
	Bach1g01153	898	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	57	676	-	-
	Bach1g01153	898	Gene3D	Transferase(Phosphotransferase) domain 1	408	678	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	166	223	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	284	414	-	-
	Bach1g01153	898	MobiDBLite	consensus disorder prediction	1	223	-	-
	Bach1g01153	898	SMART	serkin_6	410	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g01153	Bach-Chr1	24721795	24729430	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g01153	4	890	MAP Kinase Kinase Kinase	AT1G63700	57.430	0.0	866

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Bach1g01153		Pkinase	1e-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g01153	K20717		-	gmx:100792783	1377.46