Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01119 GTCTGCTTTCGTCCCAGAGATCTTCTGTCGTTCTTCATTTCTCTGCTGCCTTCCATTTCTCCGCTCGTTCTTCATCGTCTTCTGCGCCTGCAGCCTACCTGATTCCTTCGACTTTGTGAGTTCCCCTTGGAGGCACCTCCGGCATTCGGTCCATATCGGTCAGTAGCTCCCTCTCGGCCTATTTTTCTTCGGCAAGGATCCCATCGGCTAAAGGAACTCCTCTTGGTAAGCTTCTTTTCTAGTCCAACAGAAGTGCTAGAAGTAGAATATGGACGAACAAAGGCATGGTAATATGCCGGTTTTGCCATGGATGCGAGACCCTATTGATGTCACTATTCGTCAGGAATGCCCTCTTGATCAAGTCCCTTGTCTTCATCCCCGGTTGAAGTTGGCATTGCAGAATATGGGGATCTCTGAGCTCTTCCCTGTGCAAGTTGCAGTTTGGCAAGAAACAGTTGGGCCTGGTCGTTTTGAGCGAGACCTTTGTATAAATTCACCCACCGGAAGTGGAAAAACCTTAGCATATGCTTTGCCGATTGTGCAAATGCTATCAAAGCGTGTTGTAAAATGTCTGCGTGCTTTGGTGGTGGTGCCCACTCGTGATCTAGCCTTACAGGTTAAAGAAGTTTTTGATGCTATTGCATCTCCTCTAGGCTTATGTGTTGGTTTGGCTGTTGGTCAATCTTCAATAGCTGATGAAATTTCTAAGCTTGTGAATATACCAGAATATGATGCAGGCATGTCTTTTGACCCAGAAGATATTTCACTCAGGTTGCAACTTGGATTCCAAAGTAAAGTGGACATATTAGTTGCAACCCCTGGAAGGCTGATGGATCACATAAATACTACTAAAGGTTTTACACTTGAGCATCTTTATTATCTTGTGGTTGATGAAACAGATCGTTTACTCAGGGAATCATACCAATCCTGGCTACCTACCGTGCTTGAATTGACTCAATCTAGTGATGACAATATTCTTAGACCAGATAATTCTTTTCTTCCTATTCCTTTTGGTGCATTAAGGACTAGAAGAACATGTGGTGTTGAGAGGGGCTTCAAGGATAAACTGTACCCCAGGCTGACAAAGATGGTTCTATCTGCTACGGTAACCCAAGATCCAGGAAAGCTTGTTCAACTTGATCTACATCACCCTTTGTTCTTGAAAGCTGGCCAAATGCGTTATAGGCTACCAGAAAATTTGGAATCATACAAGCTGGTTTGTGAAACAAAGCTCAAACCCTTGTATTTGGTTGCCCTATTGAAAACCTTGGGAGGAGAAAAATGCATAGTTTTTACAAAATCAGTGGTTTCAACACATCGACTGTGCACATTAATGAATTGTTTTAGCAATTTGCAAATTAATATAAAGGGGTATTCAAGTCTTCAGAAGCAAGGTGTCAGAAGCAAGACACTAAAACAATTCCGGAAGGGGGAGTTCCAAGTGCTTGTGAGTTCTGATGCTATGACTCGAGGAATGGATGTTGAAGGGGTGAGAAATGTCATTAATTATGATATGCCCAAATACATAAAGACGTATGTACATCGGGCTGGTAGGACAGCAAGAGCTGGCCAGACTGGGCGTTGCTTCACATTGATTTGCAAAGATGAGGTTTGGCGATTCAAGAAATTGTTGCAAAAGGCTGAAAATAGTTCTTGCAGTGGGCACACTGTTCCCTCCTGTTTGATTGAAGCACTTGATGCTACTTATCAATCAGCTTTGAAAAAATTTAGGGTGACAATTTCAGACGAACGAAAGAAATCCAAGAGTATTTCAGAGTCTTCTCAAGCGAGCCAAGGGAATGGAAAAAAGCAGAAGAGTGAATAACTCCTTGGTTTCTGAACATCACAGAACAATGATCATTAGAACTCAACAACTAACAGAGGGAGTGCTAAAATGGAAGTCATTTGCTGAAGCATGCATGGACTTTAGGGTGTAAACTCTCAGTTCTGGAGACAGGTTCCTCAGTGGTATTTCTTGACTGCTTATTTCTTTATATCTTCTGATGTTTATCTGATTCCAACATAGATGCATCTTTTTGTTATTATTATTTTTCCAATCAAAAAATGGTTTAGTACAATTTAACACTGTATGGCGAAGTTGATATATTGAGACCAA 2116 0.4182 MDEQRHGNMPVLPWMRDPIDVTIRQECPLDQVPCLHPRLKLALQNMGISELFPVQVAVWQETVGPGRFERDLCINSPTGSGKTLAYALPIVQMLSKRVVKCLRALVVVPTRDLALQVKEVFDAIASPLGLCVGLAVGQSSIADEISKLVNIPEYDAGMSFDPEDISLRLQLGFQSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLRESYQSWLPTVLELTQSSDDNILRPDNSFLPIPFGALRTRRTCGVERGFKDKLYPRLTKMVLSATVTQDPGKLVQLDLHHPLFLKAGQMRYRLPENLESYKLVCETKLKPLYLVALLKTLGGEKCIVFTKSVVSTHRLCTLMNCFSNLQINIKGYSSLQKQGVRSKTLKQFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLICKDEVWRFKKLLQKAENSSCSGHTVPSCLIEALDATYQSALKKFRVTISDERKKSKSISESSQASQGNGKKQKSE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01119 518 CDD SF2_C_DEAD 311 443 - -
Bach1g01119 518 PANTHER RNA HELICASE 35 488 - -
Bach1g01119 518 SMART helicmild6 353 434 IPR001650 -
Bach1g01119 518 MobiDBLite consensus disorder prediction 493 518 - -
Bach1g01119 518 CDD DEADc_DDX51 39 298 - -
Bach1g01119 518 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 326 476 IPR001650 -
Bach1g01119 518 Gene3D - 22 302 IPR027417 -
Bach1g01119 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 456 IPR027417 -
Bach1g01119 518 Gene3D - 309 518 IPR027417 -
Bach1g01119 518 SMART ultradead3 47 314 IPR014001 -
Bach1g01119 518 MobiDBLite consensus disorder prediction 502 518 - -
Bach1g01119 518 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 298 IPR014001 -
Bach1g01119 518 Pfam DEAD/DEAH box helicase 53 286 IPR011545 GO:0003676|GO:0005524
Bach1g01119 518 Pfam Helicase conserved C-terminal domain 323 434 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01119 Bach-Chr1 24318481 24329116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01119 71 447 Eukaryotic Initiation Factors Gene Family AT3G13920 23.177 4.03e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01119 K14807 - qsa:O6P43_013012 777.704