Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01104 ATGGCTTCCGATCTCGAATCCAAAGCCAAAGAGGCGTTCATCGACGAGAACTACGGGCTAGCCGTCGAATTGCTCAGTCAAGCTATTGATCTCAACCCTAAGAGCGCCGAGCTCTTTGCTGACCGTGCCCAAGCCAACGTCAAACTCGACAACTTCACTGAGGCTGTTGCTGATGCAAACAGGGCAATTGAGTTAAATCCTCAACTATCAAAAGCATATTATCGCAAAGGCCTTGCATGCATGAAGCTTGAGGAATATCAAACTGCTAAAACTGCTCTGGAATCAGGTGCTTCATTGGTACCAGAAGACACAAGATTCACTAATTTGATCAAAGACTGTGACAAGCACATAGCAGAAGAGACTAGTACCATCATCGAAGAGGAAAAGATCACTCCAAACGATACATCTGTGGATAATGTTCAGCAAGTGAATGATCCTCCAGAGCCGATCATAGCTGCAGCCAAACCAAAATACAGGCATGAATTCTACCAGAAGCCTGATGAGGTGGTTGTAACTATATTTGCGAAGGGTGTCCAAAAGAACTGTGTTTCTGTTGAGTTTGGTGATCAAATACTAAGTGTTAGAATTGATGTCCCTGGTGAAGATGCATATAATTTTCAACCTCGCTTGTTTGGAAAGATAATACCTGCCACAAGTAGATATGAAGTTTTGTCCACTAAAATTGAAATTCGCCTTCCAAAAGCTGATCCAATCCAGTGGACATCTCTAGAATACAGCAAGGAAAGTGGAGTTCTACAAAGGGTTAATGTGTCCTCAGTTGCTGGTGGTCAAAGGCCTACATATCCATCCTCTAAACCAACCAAAGATTGGGATAAGCTTGAAGCTCAAGTTAAGAAAGAGGAGAAAGAAGAAAAACTTGATGGTGATGCTGCGTTGAACAAATTTTTCCGGGAGATTTATCAGGATGCCGATGAAGATACTAGAAGAGCAATGAGAAAGTCATTTGTTGAGTCAAATGGAACAGTGCTGTCTACAAACTGGAAAGAAGTGGGGTCAAAGAAGGTTGAGGGAAGTCCTCCTGACGGCATGGAGTTGAAAAAATGGGAGTACTAA 1074 0.4274 MASDLESKAKEAFIDENYGLAVELLSQAIDLNPKSAELFADRAQANVKLDNFTEAVADANRAIELNPQLSKAYYRKGLACMKLEEYQTAKTALESGASLVPEDTRFTNLIKDCDKHIAEETSTIIEEEKITPNDTSVDNVQQVNDPPEPIIAAAKPKYRHEFYQKPDEVVVTIFAKGVQKNCVSVEFGDQILSVRIDVPGEDAYNFQPRLFGKIIPATSRYEVLSTKIEIRLPKADPIQWTSLEYSKESGVLQRVNVSSVAGGQRPTYPSSKPTKDWDKLEAQVKKEEKEEKLDGDAALNKFFREIYQDADEDTRRAMRKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMELKKWEY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01104 357 SMART tpr_5 2 35 IPR019734 GO:0005515
Bach1g01104 357 SMART tpr_5 36 69 IPR019734 GO:0005515
Bach1g01104 357 SMART tpr_5 70 103 IPR019734 GO:0005515
Bach1g01104 357 PANTHER PROTEIN SGT1 HOMOLOG 1 355 IPR044563 GO:0051087
Bach1g01104 357 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Bach1g01104 357 SUPERFAMILY HSP20-like chaperones 154 248 IPR008978 -
Bach1g01104 357 ProSiteProfiles CS domain profile. 155 244 IPR007052 -
Bach1g01104 357 FunFam Protein SGT1 homolog A 153 257 - -
Bach1g01104 357 ProSiteProfiles SGS domain profile. 267 357 IPR007699 -
Bach1g01104 357 Pfam SGS domain 275 355 IPR007699 -
Bach1g01104 357 CDD p23_CS_SGT1_like 161 244 - -
Bach1g01104 357 FunFam Protein SGT1 homolog 1 127 - -
Bach1g01104 357 Pfam Tetratricopeptide repeat 14 75 - -
Bach1g01104 357 Pfam CS domain 159 234 IPR007052 -
Bach1g01104 357 SUPERFAMILY TPR-like 6 113 IPR011990 GO:0005515
Bach1g01104 357 Gene3D Tetratricopeptide repeat domain 1 144 IPR011990 GO:0005515
Bach1g01104 357 Gene3D - 151 256 IPR008978 -
Bach1g01104 357 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01104 Bach-Chr1 24087964 24092866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01104 1 99 U-box Gene Family AT3G07370 28.283 3.54e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01104 K12795 - qsa:O6P43_004245 532.332