Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01078 ATGGAAATGATGATGATAAAGAATGAAGAGAGCATGGAAAGAAACCAGATGTACATGGCAGAAGTTGAATTCAAAGGGACTCGGTGTGTCAAAAGGAAGCGAAGAGAATCTGCTGCACCTGCACTTGATAGTGAAGATAACCACCAGAGTCACACGCAGCAGCAACAGCAAAAAGTTGATCAAAATTCTACTACCACTGCAAAGAGAAGTTCAAGATTTCGCGGTGTGAGCAGACATAGATGGACAGGGCGTTTTGAAGCTCACTTGTGGGACAAGCTCTCTTGGAATGTGACACAGAAGAAGAAGGGGAAGCAAGGGGCTTATGATGAAGAAGAATCTGCAGCAAGAGCATATGATTTGGCTGCACTTAAGTACTGGGGAGCATCAACTCTCACCAATTTTCCGATATCGGATTACAAGATAGAGATGGAACTAATGCAGACTATGACAAAAGAGGAATACTTGGCCACTTTAAGAAGAAAGAGCAGTGGATTTTCAAGAGGAGTATCGAAATATAGGGGTGTTGCAAGGCACCACCACAACGGTAGATGGGAAGCACGAATAGGGAGGGTTTTTGGGAACAAATATCTCTATCTTGGCACTTACAGCACTCAAGAGGAAGCTGCTCACGCTTATGACATAGCGGCCATTGAGTACAGAGGAATCCACGCAGTGACCAACTTCGATTTGAGTAATTACATAAGATGGTTAAAGCCATCTGCTAAAGGAAATATCCCAGAAGCAACACATGAATCAAACATAGTACCAGAGGCTCAAAATGTTACATCCCCATCTAACTATACTCCACTGGAAGACTCAAATTCCTACTTGCTTAGCAGCAATTCTTTCAATACAGAGTACCTGAACTCCCCTCAAAAGCAAGATGTTTTTCAAAACAGTGCCCCGCTTAACTCATGTAATAAGTCATCTTCTCCCTCTGCGCTTGGCCTTCTTTTACGCTCTTCAGTATTTAGAGACTTAGTTGAAAAGAATTCGAATGTATCTGGAGAAGAAACTGATGGCAAAGACACAAAAGATCCTCGGCCACAGGTAGCTGGTGATGATGATTTGGGTGGAATTTACTACGATGGAATTGATGATATTCCTTTTGTCTGTGATCCCAACTTGTATAGCTTAGAATTGCAAGACAATTTCACACAGAGATGGGTATGA 1173 0.4237 MEMMMIKNEESMERNQMYMAEVEFKGTRCVKRKRRESAAPALDSEDNHQSHTQQQQQKVDQNSTTTAKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGASTLTNFPISDYKIEMELMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGIHAVTNFDLSNYIRWLKPSAKGNIPEATHESNIVPEAQNVTSPSNYTPLEDSNSYLLSSNSFNTEYLNSPQKQDVFQNSAPLNSCNKSSSPSALGLLLRSSVFRDLVEKNSNVSGEETDGKDTKDPRPQVAGDDDLGGIYYDGIDDIPFVCDPNLYSLELQDNFTQRWV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01078 390 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 MobiDBLite consensus disorder prediction 29 75 - -
Bach1g01078 390 CDD AP2 71 137 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 MobiDBLite consensus disorder prediction 331 352 - -
Bach1g01078 390 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
Bach1g01078 390 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Bach1g01078 390 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Bach1g01078 390 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 MobiDBLite consensus disorder prediction 331 356 - -
Bach1g01078 390 FunFam AP2-like ethylene-responsive transcription factor 170 231 - -
Bach1g01078 390 SUPERFAMILY DNA-binding domain 71 137 IPR016177 GO:0003677
Bach1g01078 390 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Bach1g01078 390 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 41 291 - -
Bach1g01078 390 MobiDBLite consensus disorder prediction 43 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01078 Bach-Chr1 23657630 23659608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01078 61 285 AP2-EREBP Transcription Factor Family AT5G57390 55.844 2.12e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach1g01078 AP2 2.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01078 - - gmx:100779867 508.449