Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01077 ATGGCGGCAAGTGCAATTAACAAAGTTGCATTCATCTTCTTGGCTACTTTCGCCATTACAATTCCATGCCTTGAGGCTGGTGTTGCCAAATACGATGACTTTCTCCTGAAACAAGAAGAGGAAGCCAAGAGAGTAGCTCTAGAGGCCTACCATCCCGATCCCTACAATGTCACCTCAGAGTTCAATCAACACGTTCACTTGGCATTGCAGGAACACGAGGCGGAGCTGAAGAGGATGAATATCACCAGGAGAGACCTGAGGCAGGTTAAGTTGGCGAGAGGACCATGCATGGCCACTAATCCCATTGACCGTTGCTGGAGGTGCAGGCCAGACTGGGCCAACGATCGCTTTAGATTAGCGAAATGTGTGAAGGGTTTCGGGCAGAAGACCACCGGAGGACTCGGTGGCCCGATCTACGTGGTGACTGATCCCTCCGACGACGACATGCTCAACCCTAAGCCAGGAACTCTCAGGTATGGTGCGATCCAGAACGGGCCATTGTGGATTATCTTCGAACGGAACATGGTGATCAATCTGCAGCAAGAGTTGCTGATATCATCTCACAAGACTATTGATGGTCGTGGAGCCAATGTCCAGATTAAGGGTGGTGCTAGCCTTTCCATTTTTAACGTTCAAAATATCATCGTCCATGGCATTCGCATCAAAAATATCCGTCCTGCAAGTGGTGGTGACATTGCCGACTCTGTGAATCATCATGGAACTAGAACAAGGAGCGACGGAGATGCCATTTCCATCTTTGGTAGTAGCAATATTTGGATTGATCACATTTCCATGTCTGATTGTGCGGATGGTCTTGTTGATGTCATCCAGGGTTCTACTGGTGTCACCATCTCTAACTGCCACATGACCCATCACAACGATGTGATGTTGTTTGGAGCAAGTGATTTCTTCTCAGGAGACAAGATAATGCAGGTGACAGTGGCATTCAACCATTTTGGACAGGGATTGATTCAGAGGATGCCCAGATGCAGATGGGGTTTCGTTCATGTTGTCAACAATGACTACACTCACTGGCAGATGTATGCAATTGGTGGTAGCTCTGGCCCAACCATTCTCAGCCAGGGCAACAGATTCATTGCTCCTGCCAACGATGCAGCCAAGGAGATCACACACAGAGACTATGCAGCACCAGAGGTTTATAGCAAGTGGCAATGGAGATCGGAGATGGACTTGTTGATGAATGGAGCAACGTTTACTGAGTCCGGAGCACCGTTTAATGGAAGATATCCAGTACCCCAAGAAAACATCATCAAACCCAGAGATGGTCAATTCGTTACTAGGCTTACAAGATTCTCAGGTGCACTCCCCTGCGTGGTTGGCCAGCCATGCTAG 1353 0.4848 MAASAINKVAFIFLATFAITIPCLEAGVAKYDDFLLKQEEEAKRVALEAYHPDPYNVTSEFNQHVHLALQEHEAELKRMNITRRDLRQVKLARGPCMATNPIDRCWRCRPDWANDRFRLAKCVKGFGQKTTGGLGGPIYVVTDPSDDDMLNPKPGTLRYGAIQNGPLWIIFERNMVINLQQELLISSHKTIDGRGANVQIKGGASLSIFNVQNIIVHGIRIKNIRPASGGDIADSVNHHGTRTRSDGDAISIFGSSNIWIDHISMSDCADGLVDVIQGSTGVTISNCHMTHHNDVMLFGASDFFSGDKIMQVTVAFNHFGQGLIQRMPRCRWGFVHVVNNDYTHWQMYAIGGSSGPTILSQGNRFIAPANDAAKEITHRDYAAPEVYSKWQWRSEMDLLMNGATFTESGAPFNGRYPVPQENIIKPRDGQFVTRLTRFSGALPCVVGQPC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01077 450 Coils Coil 69 89 - -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 146 171 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 348 367 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 326 345 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 122 139 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 246 267 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 182 198 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 390 414 IPR018082 -
Bach1g01077 450 PRINTS Pollen allergen Amb family signature 421 444 IPR018082 -
Bach1g01077 450 Gene3D - 99 443 IPR012334 -
Bach1g01077 450 PANTHER PECTATE LYASE 18-RELATED 42 448 IPR045032 GO:0030570
Bach1g01077 450 Pfam Pectate lyase, N terminus 28 86 IPR007524 GO:0030570
Bach1g01077 450 SMART amb_all 174 371 IPR002022 -
Bach1g01077 450 SUPERFAMILY Pectin lyase-like 100 441 IPR011050 -
Bach1g01077 450 Pfam Pectate lyase 182 365 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01077 Bach-Chr1 23651442 23653084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01077 1 450 Polysaccharide Lyase AT5G15110 51.579 8.27e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01077 K01728 - gmx:100810615 643.654