Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01041 ATGAATAGTGGGGATCAGAAAGCAAGTAGTGTGGCCATGGTTAACAAGAAGAAGAAAAATGGGTCATTTCGATCCATTTTCATGCATGCTGATGGCAGAGATTGGTTGCTGATGGTCTTAGGCATCTTAGGAGCCGTGGGTGATGGATTCTCAACCCCTCTTGTGTTGTTTGTCAGTAGCCGCTTGATGAACAATATTGGCGGCGCCAATTCCAAGGAAGGAAACGATTTCCTCCATAGTATCAATAAGAATGCAGTGGCTCTGTGTTATGTGGCGTGTGGCTCTTTCGTGGCCTGCTTCCTCGAGGGTTTTTGTTGGACAAGAACGGGTGAGAGACAAGCTGCAAAACTGAGAGCAAGGTATTTGAAAGCAATTCTAAGACAAGAAGTGGCATACTTTGATTTGCATGTGACAAGCACATCTGAAGTTATCACCAGCGTCTCAAACGATAGCCTTGTGATTCAAGATTGTTTTGGCGAAAAGGTCCCAAATTTCTTGATGAATTTCTCAATGTTCATTGGGAGCTACATAGCAGCTTTTGCAATGCTGTGGAGACTGGCTATTGTGGGGTTCCCTTTCGTGGTCCTTCTAGTAATCCCAGGTTTAATGTACGGAAGAACTTTGATGGAATTGGCGAGAAAAATCAGAGAAGAGTACAACCAAGCTGGCACAATAGCAGAGCAAGCAATATCTTCCATCAGAACCGTTTATTCCTTCGTCGGCGAAAGCAAGACCATAGCTGCTTTCTCTGATGCTCTTCAAGGCTCAGTTAAGTTGGGGCTTAGACAAGGCTTGGCTAAAGGCTTAGCAATCGGAAGCAATGGTATTGTCTTTGCCATATGGTCTTTCATGTCCTATTACAGTAGCAGACTCGTCATGTACCATGGCGCCCAAGGCGGCACGGTTTTCATGGTTGGAGCAGCCATAGCTGTTGGTGGATTATCATTAGGTGCTGGTTTATCCAACATGAAGTACTTCTCGGAAGCAAGTTCAGCAGGGGAGCGAATAATGGAAGTGATAAAAAGGGTGCCCAAGATTGATTCAGATAATATGGAAGGGGAGATTTTAGAGAAGGTTTCAGGAGAAGTGGAGTTTGACGGTGTAGAATTTGCATACCCATCAAGGCCTGGCAGCATTATTCTGAATGACTTTTGCCTAAAGATTCCAGCAGGGAGGACAGTGGCGTTGGTGGGTGGGAGTGGCTCGGGGAAATCTACAGTGATATCACTTTTGCAGAGGTTTTATGATCCACTTGGGGGAGAGATACGTGTTGATGGGGTGCCCATTCACAGGCTGCAGCTCAAGTGGCTGAGGTCACAGATGGGGTTAGTGAGCCAAGAGCCTGCTCTGTTTGCAACCAGCATTAAGGAGAACATACTTTTTGGGAAAGAGGACGCCACACATGACGAGGTTGTGGAGGCTGCCAAAGCTTCAAATGCCCATAATTTCATTTCACAGTTGCCTTTGGGATATGATACCCAGGTTGGCGAGAGAGGTGTTCAAATGTCAGGGGGACAAAAACAAAGGATCGCAATTGCACGGGCAATAATCAAGAAACCCCGAATTCTTCTGCTGGACGAAGCAACCAGCGCATTAGACTCCGAATCTGAACGTGTCGTTCAAGAAGCTCTAGACAAAGCTGCGGTGGGTCGTACTACGATCATCATCGCTCACCGTTTATCCACCATTCGAAATGCGGATGTCATTTCAGTCGTTCAGAACGGGAAAGTCATGGAGATGGGGTCACATGACAAGCTCATCGAAAACGACAATGGACTTTACACCTCACTTGTTCGTCTCCAACAAACAGAGAACTCAGAAGGACAAGAAGACAGTGTTCCCAATCCAAATTCTATCTCAAACAGAGACATCAACAGCAACAGCAGTCGTAGGCTCTCTTTGGTGAGTCGTTCTAGCTCTGCCAATTCAATAGCGCCAAGTCGAGCTTCATTTTGTGATGAAGAAGTGGACGATGTCATATGCGAAGAAAAGAAATTCCCTGTTCCGTCATTTAAGAGATTGCTTCTTTTGAATCTCCCTGAGTGGAAGCAAGCCAGCTTGGGGTGTTTGAGCGCTGTACTATTCGGTGCGGTTCAACCAGTTTACGCGTTCGCAATGGGTTCCATGATTTCTGTGTATTTTCTGACAGACCATAATGAGATCAAGGAAAAGACAAGGATGTACGCCTTGTGTTTTGTGGGCTTGGCCGTATTCTCTCTAGTTATTAATATAAGCCAGCATTATAGTTTTGCTTATATGGGAGAGTACCTGACCAAAAGGATTAGAGAGAGAATGCTTTCTAAGATACTCACCTTTGAGGTTGGGTGGTTTGATCAGGACGAGAATGCTAGCGGTGCCGTTTGTTCTAGACTTGCCAAAGATGCCAATGTGGTGAGATCGTTAGTGGGAGATCGAATGGCTCTACTCGTGCAAACATTCTCAGCCGTGATAATAGCATGCACAATGGGGTTGGTAATTGCGTGGAGGCTGGCCATTGTTATGATAGCCGTGCAACCCCTCATCATAGTGTGTTTCTACACAAGGCGTGTCCTCCTCAAGAGCATGTCAAGTAAGGCCATCAAAGCCCAAGACCAAAGTAGCAAGATAGCAGCCGAAGCTGTCTCCAACCTCAGAACCATCACTGCCTTCTCTTCCCAAGAACGAATCCTCAAAATTCTCCAAAAAGCCCAGGAAGGTCCAAGTCGCGAGAGCATTCGCCAATCGTGGTATGCGGGTATTGGACTTGCCTGCTCTCAGAGCCTCACTTCATGTACTTGGGCCCTGGACTTTTGGTACGGCGGGAAACTCATCTCCCAAGGCTACATCTCATCTAAAGCACTACTGGAGACCTTCATGATTTTGGTAAGCACAGGCCGTGTTATTGCTGATGCCGGGAGCATGACCACGGACCTTGCCAAGGGTGCTGATGCTGTGGGCTCAGTTTTTGCAGTTCTAGACAGGTACACCAAGATCGAGCCCGAAGACCCTGAGGGCTATAAGCCCAAAAAGATAATTGGCCGAATAGAACTCCGTGATGTCCATTTTGCCTACCCGGCTAGGCCCGATGTGATGATTTTTGTAGGATTCTCAATCAAGATTGAAGCAGGAAAGTCAACGGCATTGGTAGGCCAAAGTGGGTCTGGGAAATCAACCATCATAGGATTAATTGAGAGATTCTATGACCCGGTCAAAGGGACGGTGAGCATAGACAGCAGAGATATAAAATCATACCACCTAAGGTCACTGAGGAAACACATTGCATTGGTTAGCCAAGAGCCCGCGTTGTTTGGTGGGACCATAAGAGAGAACATTGCATATGGAGCGTTAGATAAAGTTGATGAAGCGGAGGTGATTGAGGCGGCGAGAGCAGCCAATGCTCATGATTTCATCTCGAGTCTTCAAGATGGTTACGATACGCTGTGTGGGGACAGAGGTGTGCAACTGTCGGGAGGGCAGAAGCAGAGGATAGCAATCGCACGGGCTATACTGAAGAACCCAACAGTGTTATTGCTGGACGAAGCGACTAGCGCGCTTGATAGTCAGTCAGAGAAGGTGGTGCAAGATGCGCTGGAGCGCGTGATGGTGGGGAGGACAAGCGTGGTGGTAGCCCACAGGTTGAGCACCATACAAAACTGTGATCTAATTGCGGTGTTGGATAAGGGGAAGGTGGTGGAAAGAGGGACCCACCCGTCTTTGTTAGCGAAGGGACCAAGTGGAGTTTATTACTCTTTGGTTAGTCTTCAAAGGAGGCCATCCAACAATGGTCACCCAATTAACTAA 3780 0.4714 MNSGDQKASSVAMVNKKKKNGSFRSIFMHADGRDWLLMVLGILGAVGDGFSTPLVLFVSSRLMNNIGGANSKEGNDFLHSINKNAVALCYVACGSFVACFLEGFCWTRTGERQAAKLRARYLKAILRQEVAYFDLHVTSTSEVITSVSNDSLVIQDCFGEKVPNFLMNFSMFIGSYIAAFAMLWRLAIVGFPFVVLLVIPGLMYGRTLMELARKIREEYNQAGTIAEQAISSIRTVYSFVGESKTIAAFSDALQGSVKLGLRQGLAKGLAIGSNGIVFAIWSFMSYYSSRLVMYHGAQGGTVFMVGAAIAVGGLSLGAGLSNMKYFSEASSAGERIMEVIKRVPKIDSDNMEGEILEKVSGEVEFDGVEFAYPSRPGSIILNDFCLKIPAGRTVALVGGSGSGKSTVISLLQRFYDPLGGEIRVDGVPIHRLQLKWLRSQMGLVSQEPALFATSIKENILFGKEDATHDEVVEAAKASNAHNFISQLPLGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVISVVQNGKVMEMGSHDKLIENDNGLYTSLVRLQQTENSEGQEDSVPNPNSISNRDINSNSSRRLSLVSRSSSANSIAPSRASFCDEEVDDVICEEKKFPVPSFKRLLLLNLPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLTDHNEIKEKTRMYALCFVGLAVFSLVINISQHYSFAYMGEYLTKRIRERMLSKILTFEVGWFDQDENASGAVCSRLAKDANVVRSLVGDRMALLVQTFSAVIIACTMGLVIAWRLAIVMIAVQPLIIVCFYTRRVLLKSMSSKAIKAQDQSSKIAAEAVSNLRTITAFSSQERILKILQKAQEGPSRESIRQSWYAGIGLACSQSLTSCTWALDFWYGGKLISQGYISSKALLETFMILVSTGRVIADAGSMTTDLAKGADAVGSVFAVLDRYTKIEPEDPEGYKPKKIIGRIELRDVHFAYPARPDVMIFVGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPVKGTVSIDSRDIKSYHLRSLRKHIALVSQEPALFGGTIRENIAYGALDKVDEAEVIEAARAANAHDFISSLQDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVERGTHPSLLAKGPSGVYYSLVSLQRRPSNNGHPIN 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01041 1259 Gene3D - 998 1256 IPR027417 -
Bach1g01041 1259 FunFam ABC transporter B family member 4 353 609 - -
Bach1g01041 1259 MobiDBLite consensus disorder prediction 604 625 - -
Bach1g01041 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Bach1g01041 1259 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524|GO:0016887
Bach1g01041 1259 SMART AAA_5 1035 1228 IPR003593 GO:0016887
Bach1g01041 1259 SMART AAA_5 390 576 IPR003593 GO:0016887
Bach1g01041 1259 PANTHER ABC TRANSPORTER B FAMILY 13 743 IPR039421 -
Bach1g01041 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 336 - -
Bach1g01041 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1245 IPR003439 GO:0005524
Bach1g01041 1259 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Bach1g01041 1259 FunFam ABC transporter B family member 4 998 1254 - -
Bach1g01041 1259 SUPERFAMILY ABC transporter transmembrane region 29 347 IPR036640 GO:0005524|GO:0016020
Bach1g01041 1259 SUPERFAMILY ABC transporter transmembrane region 665 992 IPR036640 GO:0005524|GO:0016020
Bach1g01041 1259 Pfam ABC transporter 1029 1176 IPR003439 GO:0005524
Bach1g01041 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Bach1g01041 1259 Gene3D ABC transporter type 1, transmembrane domain 26 974 IPR036640 GO:0005524|GO:0016020
Bach1g01041 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01041 1259 Pfam ABC transporter transmembrane region 38 308 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01041 1259 Pfam ABC transporter transmembrane region 687 954 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01041 1259 CDD ABC_MTABC3_MDL1_MDL2 363 601 - -
Bach1g01041 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 39 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach1g01041 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 601 IPR027417 -
Bach1g01041 1259 FunFam Putative ABC transporter B family member 8 651 996 - -
Bach1g01041 1259 Gene3D - 353 602 IPR027417 -
Bach1g01041 1259 FunFam ABC transporter B family member 1 25 362 - -
Bach1g01041 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1248 IPR027417 -
Bach1g01041 1259 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Bach1g01041 1259 CDD ABC_MTABC3_MDL1_MDL2 1008 1248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01041 Bach-Chr1 23076198 23082043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01041 22 1249 Calmodulin-binding Proteins AT2G36910 44.783 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01041 K05658 - gmx:100807709 1972.59