Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01020 TCAAGAGACTGTGAGGGTCATGGTCCACAGGTCTATGCAGAAAAGATGGGTTTTTGATAAAGGAACTGAACAAGAACCCAACTCTCCCCGGCGCAAATGGAAGATTTTCCACAAATCATCTTCGGCTATCACTGCAAAACTCTCTTCAAAACTGAAAAATAAGCAGCCCCCGGAGGAGTTTCTTTGTCCCATATCACAATCTCTCATGGCAAATCCAGTTATTGTCTCCTCAGGGCACACCTTCGAGGGAGTCCTTGTTCAAGCGTGCAAAAATTTGAACTTTACCCCATCCCTCTATGATGGCTCTACCCCTGATATTTCCACCGTAATCCCCAATTTAGCCCTTAAATCCGCCATTGCCAAATGGTGCCAATCCTCTTCCGTCGTCCCACCTGAGCCTCCTGATATCAACTCAGCAGAGAAGCTCATTCGTTCACTCATGGCGACACAGAAGGAAACAGAAGCAGAAAACCTGAAAGTCTCAGAGAAAGAGCTAATCGAAGGGATGAGGGATAACCCACCAGTGAATTTCAATCACGCAGCCACCGCAGTCACGCGGCGACCCACCCATTTCTACTCGAGCTCAGAGGAATCGGTGGGCACCACCGCATCTACCCCGCCTCTGCAACTTTCGACACGACCCAGTTGCTATTCTTCTCCATCGTCTTCAGAAATCGACGCCATGACTCCGAGCTCGCCTGAAGAAGAAGAAATCATGGCGAAATTAAGAAGCTCACAAGTGTTCGAGATCGAAGAGGCCGTAGTTTCACTGAGAAAGCTCACCAGGACGAAGGAGGAGACTAGGGCCCACCTGTGTAGCCCTCGGTTACTGTCCGCCCTACGATCGTTGATAATCTCGAAATACACAAATATTCAGGTGAACGCGGTGGCAGCGGTGGTGAATCTCTCATTGGAGAAAGTGAACAAGGTGAAGATCGTACGTTCAGGAATCGTTCCTCCGTTGGTTGATGTTTTGAAAGGTGGATTCCCTGAGGCGCAGGAACACGCTTCCGGTGCACTCTTCAGCTTAGCCCTCGACGACGATAACAAAAGCGCAATTGGGGTTCTGGGTGCACTGCTACCCTTGCTCCACTTTCTCCGATCTGAGAGCGAGAGAACTCGGCAAGACTCGGCCCTTGCTCTTTACCACCTCTCGCTAGTTCAGAGCAACCGGGTCAAGCTGGTTAAGTTAGGGTCGGTTCATGTTCTGCTGAACATGGTGAAGTCGGGTCATATGACGGGACGGGTTCTACTGATACTCTGCAACTTGGCATCTTGTGCGGATGGGAGGGCTGCAATGTTGGACGCGGGAGCCGTAGACTGCTTGGTGGCGATTTTGAACGGGAGTGACATGTGTTCCGGGTCGACCCGGGAAAGTTGCGTGGCGGTGTTGTATGCACTGAGTCATGGCGGGTTAAGGTTCAAGGCGGCGGCGAAGGCGGCTGGGGCAGTGGAGGTGTTGAGGAAGGTAGAGAAGATGGGAAGCGAGAGGGCGAGAGAGAAGGTGAAGAGGATATTGGAGTTGATGAGAGGGAAAGAAGAGGAAGAAGAAGACGTTGATTGGGAGGAGCTTCTCGACTCAGGGTTGGGGAGTCGAACTCGGGTTTGGCACAATGCTGGGGCGGGCGAGTCGACGGCTAACTCGTCCGAGTTTTGAATGGTGAAGTCGGGTCATATGACGGGACGGGTTCTACTGATACTCTGCAACTTGGCATCTTGTGCGGATGGGAGGGCTGCAATGTTGGACGCGGGAGCCGTAGACTGCTTGGTGGCGATTTTGAACGGGAGTGACATGTGTTCCGGGTCGACCCGGGAAAGTTGCGTGGCGGTGTTGTATGCACTGAGTCATGGCGGGTTAAGGTTCAAGGCGGCGGCGAAGGCGGCTGGGGCAGTGGAGGTGTTGAGGAAGGTAGAGAAGATGGGAAGCGAGAGGGCGAGAGAGAAGGTGAAGAGGATATTGGAGTTGATGAGAGGGAAAGAAGAGGAAGAAGAAGACGTTGATTGGGAGGAGCTTCTCGACTCAGGGTTGGGGAGTCGAACTCGGGTTTGGCACAATGCTGGGGCGGGCGAGTCGACGGCTAACTCGTCCGAGTTTTGAGTACATCCTTCGCTCTGTTTCTTTTTATTTCCTTTTTCTTTTTACTGTAATTATTTTTCTTTTGCTCTTTTCATTTTTAAACAATGCTTTTGAAGCTCATTTGGTTTCTCTTCTCATGAATGGAGATAGCATACCAAAGTGAAAATACTTGGTTTCTGTTTTTCTGTTTAGTTGGAAATAGAAATGGGTTCTGATTTTTT 2298 0.5074 MEIQETVRVMVHRSMQKRWVFDKGTEQEPNSPRRKWKIFHKSSSAITAKLSSKLKNKQPPEEFLCPISQSLMANPVIVSSGHTFEGVLVQACKNLNFTPSLYDGSTPDISTVIPNLALKSAIAKWCQSSSVVPPEPPDINSAEKLIRSLMATQKETEAENLKVSEKELIEGMRDNPPVNFNHAATAVTRRPTHFYSSSEESVGTTASTPPLQLSTRPSCYSSPSSSEIDAMTPSSPEEEEIMAKLRSSQVFEIEEAVVSLRKLTRTKEETRAHLCSPRLLSALRSLIISKYTNIQVNAVAAVVNLSLEKVNKVKIVRSGIVPPLVDVLKGGFPEAQEHASGALFSLALDDDNKSAIGVLGALLPLLHFLRSESERTRQDSALALYHLSLVQSNRVKLVKLGSVHVLLNMVKSGHMTGRVLLILCNLASCADGRAAMLDAGAVDCLVAILNGSDMCSGSTRESCVAVLYALSHGGLRFKAAAKAAGAVEVLRKVEKMGSERAREKVKRILELMRGKEEEEEDVDWEELLDSGLGSRTRVWHNAGAGESTANSSEF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01020 554 Pfam U-box domain 60 128 IPR003613 GO:0004842|GO:0016567
Bach1g01020 554 Pfam Armadillo/beta-catenin-like repeat 311 347 IPR000225 GO:0005515
Bach1g01020 554 Pfam Armadillo/beta-catenin-like repeat 349 388 IPR000225 GO:0005515
Bach1g01020 554 SUPERFAMILY ARM repeat 241 510 IPR016024 -
Bach1g01020 554 Coils Coil 498 518 - -
Bach1g01020 554 Gene3D - 235 511 IPR011989 -
Bach1g01020 554 ProSiteProfiles U-box domain profile. 58 132 IPR003613 GO:0004842|GO:0016567
Bach1g01020 554 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 319 356 IPR000225 GO:0005515
Bach1g01020 554 Coils Coil 139 159 - -
Bach1g01020 554 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 132 IPR013083 -
Bach1g01020 554 PANTHER U BOX DOMAIN-CONTAINING 43 513 - -
Bach1g01020 554 SMART Ubox_2 62 125 IPR003613 GO:0004842|GO:0016567
Bach1g01020 554 MobiDBLite consensus disorder prediction 193 232 - -
Bach1g01020 554 FunFam RING-type E3 ubiquitin transferase 236 512 - -
Bach1g01020 554 SMART arm_5 267 307 IPR000225 GO:0005515
Bach1g01020 554 SMART arm_5 349 389 IPR000225 GO:0005515
Bach1g01020 554 SMART arm_5 429 472 IPR000225 GO:0005515
Bach1g01020 554 SMART arm_5 308 348 IPR000225 GO:0005515
Bach1g01020 554 SUPERFAMILY RING/U-box 56 135 - -
Bach1g01020 554 MobiDBLite consensus disorder prediction 193 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01020 Bach-Chr1 22784923 22786787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01020 1 554 U-box Gene Family AT5G40140 54.804 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01020 - - qsa:O6P43_004571 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01020 1 22784923 22786787 Bach2g02091 2 28188652 28190238 ECH
Bach1g01020 1 22784923 22786787 Bach1g01020 1 22784923 22786787 ECH