Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00989 GTTCATTCCCATCTTTGACAATCATCCAGAAGAAAATTTTCTATTCTTTAATCTGGATATTCCATTTTCTTCATAATATTGAATCGAATTTGAAGTAACCTCAATATTTTTGTCAAATTTTGTGGCTATATTTTTGCTTTGCGTAGCTCAAGATGAGTGGGACGGAGAATTCAAAGGCTACAGTTTTGGATGGGCTGGTTGAGTGTATAAAGGAGATTTCTTGTTTACCCGAATGCCAAAACATTTGCAAGAGGTTGTATGGAAATTTGGTTCGGAGGGTGAAGCTACTGAGCCCTCTCTTTGAAGAAGTGAAGGATAGTGATATATCTCTAAGCGAAGAAGAACATAGAGCCTTTGAATCGCTGAGAGATGCTCTGGATTCAGCTAAGAACCTTCTTAAGTATGTGAACCAAGGGAATAAGCTTTATCAGGCTTTGCGAAGGAATGAGACTGCAGATAAGTTCCAATGTATACATGAGAGAATTGAATCTGCGTTGAGTGAAATTCCATACAACAAACTCAATCTATCAGAGGAAGTTCAAGAACAGATTCAACTTGTGCATGCTCAATTCAAAAGAGCCAATGCTAGAACTGAATTAACTGACGTACAACTAGATTTGGATTTAGCAACAGCACAAACAGATAGAGAACCTGATCCTGCAGTACTCAGAAGACTTGCTGAAAAGTTGCATCTCAGGACTATAAATGACTTAAAGAAAGAGTCCAGTGAATTTCATGAATTGGTTATCTCTAGTGGTGGAGAACTAGGAGACCATTTTGAGATGATGTCATCCCTTCTTAAGAAGCTGAAGGACTCTGCGGTCACAGAAAATCCTGAAGTTGACACCTATGAGGGTGAAAAAGTTTATATAAAGCACAGATCTCCTGTAATCCCAGATGATTTTCGATGTCCAATATCTCTTGAACTAATGCAAGATCCTGTAATTGTCTCTACTGGACAGACATACGAAAGATCCTGTATTCAAAAATGGCTTGATGCTGGACATAAAACCTGTCCTAAGACTCAGCAGACACTTTTGCATACGGCACTAACCCCTAATTATGTTTTGAAGAGTTTGATTGCTTTATGGTGTGAAAACAATGGTGTTGAGCTACCAAAGAAGCAAGGGAGCTGTAGAACAAAGAAACCTGGAAGCAGTTTTTCGGATTGTGATCGAGAAGCTATTAGTGCTTTATTGGATAAACTTGTGAATGGTAATATAGAGCATCAAAGGGCAGCTGCTGGGGAGCTCCGTCTTCTGGCTAAGAGGAATGCAGATAATAGAGTATGTATTGCTGAGGCTGGAGCAATTCCACTTCTTGTAGATCTGTTGTCTTCCTCAGATACTCGTACCCAGGAGCATGCTGTTACAGCACTTCTCAATCTTTCCATCAATGAGAGTAACAAAGGAACTATAGTGAATGCAGGAGCTATACCTGACATTGTTGATGTACTGAAAAATGGCAGCATGGAGGCAAGAGAGAATGCAGCTGCAACTCTCTTTAGTTTATCAGTTCTAGATGAGAACAAAGTTGCAATTGGGGCAGCTGGGGCTATACCAGCTTTGATAACATTGCTTTGTGAAGGCACTCCCAGAGGTAAAAAAGATGCCGCAACTGCTATTTTTAATCTTTCAATCTATCAGGGGAACAAAGCAAGAGCTGTAAAGGCAGGTATAGTGGCCCCACTGATGGGATTTCTGAAGGACGCTGGAGGTGGAATGGTAGATGAAGCACTGGCTATACTAGCAATCCTGGCTAGCCATCATGAAGGCAAAATAGCGATTGGTCAGGCCGAGCCAATTCCTATTCTAGTTGAGGTTATACGAACTGGCTCCCCTCGCAACCGGGAGAATGCTGCTGCTGTCTTGTGGTCACTATGCACAGGTGATTTAGTGCAGCTGCGACTAGCAAAGGATTTTGGTGCAGAACATGCATTGAAGGAGTTATCAGAGACTGGCACTGATAGGGCTAAGAGAAAAGCTTTAAGTATATTAGAACTTTTACAACGAATGGAAGGGAATGTTGATTTGTAA 2036 0.4101 MSGTENSKATVLDGLVECIKEISCLPECQNICKRLYGNLVRRVKLLSPLFEEVKDSDISLSEEEHRAFESLRDALDSAKNLLKYVNQGNKLYQALRRNETADKFQCIHERIESALSEIPYNKLNLSEEVQEQIQLVHAQFKRANARTELTDVQLDLDLATAQTDREPDPAVLRRLAEKLHLRTINDLKKESSEFHELVISSGGELGDHFEMMSSLLKKLKDSAVTENPEVDTYEGEKVYIKHRSPVIPDDFRCPISLELMQDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKKQGSCRTKKPGSSFSDCDREAISALLDKLVNGNIEHQRAAAGELRLLAKRNADNRVCIAEAGAIPLLVDLLSSSDTRTQEHAVTALLNLSINESNKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVAIGAAGAIPALITLLCEGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVAPLMGFLKDAGGGMVDEALAILAILASHHEGKIAIGQAEPIPILVEVIRTGSPRNRENAAAVLWSLCTGDLVQLRLAKDFGAEHALKELSETGTDRAKRKALSILELLQRMEGNVDL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00989 627 SUPERFAMILY ARM repeat 341 618 IPR016024 -
Bach1g00989 627 Gene3D - 9 121 IPR036537 GO:0007166
Bach1g00989 627 SMART arm_5 497 537 IPR000225 GO:0005515
Bach1g00989 627 SMART arm_5 374 414 IPR000225 GO:0005515
Bach1g00989 627 SMART arm_5 456 496 IPR000225 GO:0005515
Bach1g00989 627 SMART arm_5 538 578 IPR000225 GO:0005515
Bach1g00989 627 SMART arm_5 415 455 IPR000225 GO:0005515
Bach1g00989 627 Gene3D - 338 424 IPR011989 -
Bach1g00989 627 SUPERFAMILY RING/U-box 247 322 - -
Bach1g00989 627 SMART Ubox_2 250 313 IPR003613 GO:0004842|GO:0016567
Bach1g00989 627 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 320 IPR013083 -
Bach1g00989 627 Gene3D - 521 624 IPR011989 -
Bach1g00989 627 Pfam Armadillo/beta-catenin-like repeat 457 495 IPR000225 GO:0005515
Bach1g00989 627 Pfam Armadillo/beta-catenin-like repeat 374 413 IPR000225 GO:0005515
Bach1g00989 627 FunFam RING-type E3 ubiquitin transferase 330 624 - -
Bach1g00989 627 CDD RING-Ubox_PUB 248 300 IPR045210 -
Bach1g00989 627 Gene3D - 425 520 IPR011989 -
Bach1g00989 627 FunFam RING-type E3 ubiquitin transferase 8 121 - -
Bach1g00989 627 Pfam U-box domain 247 317 IPR003613 GO:0004842|GO:0016567
Bach1g00989 627 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 385 427 IPR000225 GO:0005515
Bach1g00989 627 CDD MLKL_NTD 9 141 - -
Bach1g00989 627 ProSiteProfiles U-box domain profile. 246 320 IPR003613 GO:0004842|GO:0016567
Bach1g00989 627 FunFam RING-type E3 ubiquitin transferase 247 320 - -
Bach1g00989 627 PANTHER U BOX DOMAIN-CONTAINING 36 618 - -
Bach1g00989 627 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 426 468 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00989 Bach-Chr1 22272463 22275949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00989 7 623 U-box Gene Family AT3G54850 65.858 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00989 - - gmx:100777452 1001.12