Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00972 ATGGGTAATGTCGAAATTCCTAATTGGCTCAAACGACTGCCATTGGCACCAGAATTTCGACCTACTGACACTGAATTCGCCGACCCTATTGCATATATATCAAAGATTGAGAAGGAAGCTAGCGCTTTTGGTATTTGTAAGATTATCCCACCATTACCGAAACCTTCAAAAAGATATGTTTTTTCTAATTTGAATAAGTCGCTTGTGAAGTGCTCAGAATTGGGTTCAGATGTCATTTCCTCTAGTGTTTGTAATTCTTTGAAAATGAATTCTGGGGATAGTGGTAGTGATGGGGAGGAGCGAGCTGTGTTTACTACAAGGCAGCAAGAATTGGGGCAGAGCATGAAGAAAATCAAAGAAAGAGTTCAAAGTTCGCTGTCAGGTGTAAATAAGCAAGTATGGCAGAGTGGGGAGATCTATACACTAGAGCAGTTTGAGTCTAAATCAAAGGCTTTTGCAAGAAGCGTACTAGGAATGGCTAAGGAGGTTTCTCCTCTGGTTATAGAGGCTATGTTTTGGAAAGCAACTTTGGAGAAACCTATATATGTGGAGTATGCCAATGATGTGCCTGGGTCTGCTTTTGGGGAATCAAATGGTCAATCTCATTATATTCATAAACGGAGAAGAAGAAAGGGTTATTATAAGAGAAGTCCAGCTAGTTCTGATTGCAAGAAAACTGAAATGGATGGCAATAGAGATGCCAACGCTGATGTGAATAGGGATACTTCTGCCAAAAATCAAGCTGATACGTGTTTACAAACATCTATGTCAACTGCAGCTCTGTCAACATTATCATCAAATGAAGGTCCACATTCTTCTTGGCAAAAGAGTTCGGATGCCAGCAATGAGATGGAAGGAACTGCTGGTTGGAAGCTTTCCAACAGTCCTTGGAACTTACAAGTTATTGCACGGTCACCTGGATCACTAACACGGTTCATGCCAGATGATATTCCAGGTGTCACTTCCCCGATGATATACATTGGAATGTTGTTCAGTTGGTTTGCTTGGCACGTAGAGGATCATGAGCTTCATAGCTTGAATTTTCTTCACACTGGCTCACCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTACTTTTGAAGAAGTTATCCGCTCTGAAGCTTATGGTGGTAATATTGATCACTTAGCTGCACTAACACTCTTGGGCGAGAAGACAACTCTTCTCTCACCTGAGGTAGTTGTTATGTCTGGGATTCCTTGTTGCAGGTTAATACAGAACCCTGGCGAATTTGTTGTGACTTTTCCAAGGGCTTATCATATAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTACAGTAGCCAAGGAAGCTGCAGTCCGAAGAGCTGCTATGAATTATCTTCCCATGCTCTCCCATCAGCAACTGCTTTACTTGTTGACCATGTCTTTCATTGCAAGAGTGCCAAGATCATTATTACCAGGTGTGCGAAGTTCTCGTTTAAGAGACCGTCAGAGAGAAGAAAGAGAGTTATTAGTGAAGAAGGCTTTTATGGAAGATGTGCTGCATGAAAATAATCTGCTATCCATTCTTCTTGAAAGGGGATCAACTCATCATGCTGTTTTATGGAATGCTGATTTACTGCCAGATTATAGCAAACATTCTCTGATGCCTGATTTGGCTACTACTTCTGAAACTTCTGTGGTGGACATGTCAAATATTAGTTCTGCAGATAAGAATACTGATGGTAATCTGTTTGAAGAGATGAGTTTGTCTATGGAGAATCTGGCTAATTTATGTCTGGGTGATGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGTTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGACTGTGGTACAACCATCTGAGAGTTCATTAATGGAACTTCTACCTGCAAATCATCATCTACTTCCAAATTCCTCTCCATACCTTAGTGCCTCCATGCAAGGCTCTGTTTCCAGCAAAGGAAATCTCCTTTCTGACATTTCTTCAGCAAAGGAATTACCCAAACCATCATTGACGAATTTTGACAGAGTTCAGAATATCTCTAGTAAATTCTTTAGGCCACGAATCTTCTGCCTAGAGCATGCTCTTCAGATTGTGGAGATGTTGCACGGTAAAGGTGGAGCCAAGGTGCTTGTTATTTGCCATTCAGACTATCAGAAAATAAAGGCTCATGTCAGAGCAGTTGCAGAGGAAATAGGTAGTGCTTTTGATTATAATGAAGTTACATTAGATGTTGCATCCCCAGAAGATTTGACCTTGATAGATTTGGCAATTGATGGTGAAGAACTTGATGAATGTGAAGAAGACTGGACATCTAAACTTGGTATCAACCTACGATATTGTGTCAAAGCAAGAAAGAACTCACCATCTAAAGAAGTTCCTTATGCACTGGCATTGGGGATGCTTTTCTCTGATAATGGCCATAGTTCAGAATTCTTATCCACAAAATGGCAGTCACGAAGATCTCGCTCCAAAAGGTTAAAACATGTAGGCCAGGCTAAAGCATGTGACAGTACTGAGACAAAGAAGGATGATCAATCAGGGGGAAGAGTAGAATTAATGGGGGGATCTACTCCTAAAAATGAAATTGTATTTCAATATTCACGGAGAAAGTTCAAGTCAAAGCAAACTTGTTTACCTGGAAAAAGTGCTTTGGAAGGATGTTCTGGAGGTCCCAAAAAGAATTATGTTGCTGAAAGCAATAGCAAAGCTATGTCCTTTAAAGAGACGACTGAGCTAGAAATTATTACTTTGAACAGAAGTGAAGAGGAACCTGGTCCCAGCTATGATAAACCAACAAGTGAGCATGCTCCGGTTGGAGAAGGCTTTGAAGTTCCAGTAGAGCTTTCTGCTGCGGACTTGTATGATCCTGTCACTTTGGATACTGAAATGCGGGAGGATATGCAAATTGGAGAAGGTAACAACAGGAAAATAAATCCATGTTCTCATCTTTCAGTGAAACTAAGTTGTGAATATCCTAGAGGGAAACAGGCTAAAGGGTTGAATCAAGTGATTTCAGACTCTGAAATGCAGCATCAGATACAGAACGAGAATAAAATTAGTGAGGAACCTGCCCCTAGTTATGTTCCAAAAGGGGAACCCAAAAGTATAACTGTCTCAGGAGTAATATGTTCCCAGGTTTCACAGGAGGCCCGTCCCAAAGGAGAATCAAATACTCAATTTATTTCATATAGAAGAAGGGAACCACAAACTCAACCAAAAAGTATAAATGAAGATGAACTGTGCTCTGGGACTGAGACTTCACTGATGGAGTCTTCTGTCTCAATTCAAGAATGTTCTGCAATTCAGAAAGAGGCATGTTATATGGAAAAAAATGGGACTGAAGTTCATTTGTCACAAGATAATAGGGAGTTGGAAGTCTCTGAGTTAACCACACCAGCCCCCAGGTCAAATGCTGGGAAGAAGAGAGAGCAGAAAGTGGAGCGGATAACAAAGGACAAGGACAATTTCAGCTGCTACGGCTTTGCTAGGAGTCCATGTGAAGGGTTGAGGCCAAGGGCTGGAAATGTAGCCCCAGGTAAAAGCAGCAATGCTGTCAAGGAAACTCTGGAGACTAAAATGACAAGAAAATATCCTGGCGTTCTGGTTTCTCACCAGAATAAAAAGGTTGAAGTCAAGAGGTCTCATAAGTGTGATATTGATGGTTGTTGTATGAGTTTCACGACCATAGCAGAGTTAAAGCTGCACAAACGCAACCGTTGCCCACATGAGGGATGTGGAAAGAAGTTCAATTCGCACAAATATGCTATGATTCACCAGCGTGTTCATGATGATGAGAGGCCCTTCAAGTGCCCTTGGAAAGGTTGCTCCATGTCATTCAAGTGGGCATGGGCTAGGACAGAGCATATACGGGTTCATACTGGGGAGAAGCCATATCAGTGCAAGGTTGAGGGATGTGGCCTTTCTTTCAGGTTTGTGTCAGATTATAGCAGACACAGAAGGAAACTGGGGCACTATGTGAAGTAA 4026 0.4163 MGNVEIPNWLKRLPLAPEFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLVKCSELGSDVISSSVCNSLKMNSGDSGSDGEERAVFTTRQQELGQSMKKIKERVQSSLSGVNKQVWQSGEIYTLEQFESKSKAFARSVLGMAKEVSPLVIEAMFWKATLEKPIYVEYANDVPGSAFGESNGQSHYIHKRRRRKGYYKRSPASSDCKKTEMDGNRDANADVNRDTSAKNQADTCLQTSMSTAALSTLSSNEGPHSSWQKSSDASNEMEGTAGWKLSNSPWNLQVIARSPGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSPKTWYAVPGDYAFTFEEVIRSEAYGGNIDHLAALTLLGEKTTLLSPEVVVMSGIPCCRLIQNPGEFVVTFPRAYHIGFSHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFIARVPRSLLPGVRSSRLRDRQREERELLVKKAFMEDVLHENNLLSILLERGSTHHAVLWNADLLPDYSKHSLMPDLATTSETSVVDMSNISSADKNTDGNLFEEMSLSMENLANLCLGDDDLPCHFQTDSGALVCVGCGILGFPFMTVVQPSESSLMELLPANHHLLPNSSPYLSASMQGSVSSKGNLLSDISSAKELPKPSLTNFDRVQNISSKFFRPRIFCLEHALQIVEMLHGKGGAKVLVICHSDYQKIKAHVRAVAEEIGSAFDYNEVTLDVASPEDLTLIDLAIDGEELDECEEDWTSKLGINLRYCVKARKNSPSKEVPYALALGMLFSDNGHSSEFLSTKWQSRRSRSKRLKHVGQAKACDSTETKKDDQSGGRVELMGGSTPKNEIVFQYSRRKFKSKQTCLPGKSALEGCSGGPKKNYVAESNSKAMSFKETTELEIITLNRSEEEPGPSYDKPTSEHAPVGEGFEVPVELSAADLYDPVTLDTEMREDMQIGEGNNRKINPCSHLSVKLSCEYPRGKQAKGLNQVISDSEMQHQIQNENKISEEPAPSYVPKGEPKSITVSGVICSQVSQEARPKGESNTQFISYRRREPQTQPKSINEDELCSGTETSLMESSVSIQECSAIQKEACYMEKNGTEVHLSQDNRELEVSELTTPAPRSNAGKKREQKVERITKDKDNFSCYGFARSPCEGLRPRAGNVAPGKSSNAVKETLETKMTRKYPGVLVSHQNKKVEVKRSHKCDIDGCCMSFTTIAELKLHKRNRCPHEGCGKKFNSHKYAMIHQRVHDDERPFKCPWKGCSMSFKWAWARTEHIRVHTGEKPYQCKVEGCGLSFRFVSDYSRHRRKLGHYVK 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00972 1341 MobiDBLite consensus disorder prediction 195 249 - -
Bach1g00972 1341 Pfam jmjN domain 17 50 IPR003349 -
Bach1g00972 1341 SMART c2h2final6 1282 1306 IPR013087 -
Bach1g00972 1341 SMART c2h2final6 1252 1276 IPR013087 -
Bach1g00972 1341 SMART c2h2final6 1312 1338 IPR013087 -
Bach1g00972 1341 SMART c2h2final6 1229 1251 IPR013087 -
Bach1g00972 1341 MobiDBLite consensus disorder prediction 262 286 - -
Bach1g00972 1341 ProSitePatterns Zinc finger C2H2 type domain signature. 1254 1276 IPR013087 -
Bach1g00972 1341 ProSiteProfiles Zinc finger C2H2 type domain profile. 1252 1281 IPR013087 -
Bach1g00972 1341 SMART cupin_9 291 460 IPR003347 -
Bach1g00972 1341 Gene3D Classic Zinc Finger 1309 1336 - -
Bach1g00972 1341 SUPERFAMILY beta-beta-alpha zinc fingers 1300 1334 IPR036236 -
Bach1g00972 1341 Gene3D Classic Zinc Finger 1251 1285 - -
Bach1g00972 1341 ProSiteProfiles Zinc finger C2H2 type domain profile. 1312 1341 IPR013087 -
Bach1g00972 1341 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Bach1g00972 1341 Gene3D Classic Zinc Finger 1286 1308 - -
Bach1g00972 1341 SUPERFAMILY beta-beta-alpha zinc fingers 1270 1310 IPR036236 -
Bach1g00972 1341 ProSitePatterns Zinc finger C2H2 type domain signature. 1284 1306 IPR013087 -
Bach1g00972 1341 SMART JmjN_1 15 55 IPR003349 -
Bach1g00972 1341 MobiDBLite consensus disorder prediction 215 239 - -
Bach1g00972 1341 Pfam JmjC domain, hydroxylase 325 443 IPR003347 -
Bach1g00972 1341 ProSiteProfiles Zinc finger C2H2 type domain profile. 1282 1311 IPR013087 -
Bach1g00972 1341 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1278 - -
Bach1g00972 1341 MobiDBLite consensus disorder prediction 849 868 - -
Bach1g00972 1341 SUPERFAMILY Clavaminate synthase-like 292 458 - -
Bach1g00972 1341 FunFam Probable lysine-specific demethylase ELF6 1279 1308 - -
Bach1g00972 1341 Gene3D Cupin 9 464 - -
Bach1g00972 1341 ProSiteProfiles JmjC domain profile. 294 460 IPR003347 -
Bach1g00972 1341 ProSitePatterns Zinc finger C2H2 type domain signature. 1314 1338 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00972 Bach-Chr1 21753295 21761083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00972 1 884 C2H2 Transcription Factor Family AT5G04240 58.444 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g00972 JmjC 3.2e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00972 - - adu:107467970 1456.04